Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:33284016..33286661-chr6:33471005..33472744,2	K562	blood:
2	chr6:33463213..33467360-chr6:33468926..33472563,4	K562	blood:

Variant related genes	Relation type
ENSG00000236104	Chromatin interaction

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs11963294	1.00[CHB][hapmap]
rs12529825	1.00[CHB][hapmap]
rs1755038	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1755040	1.00[ASN][1000 genomes]
rs210131	1.00[ASN][1000 genomes]
rs210153	1.00[ASN][1000 genomes]
rs210190	1.00[ASN][1000 genomes]
rs2941555	1.00[ASN][1000 genomes]
rs3106196	1.00[ASN][1000 genomes]
rs3116713	1.00[ASN][1000 genomes]
rs3119026	1.00[ASN][1000 genomes]
rs3130013	1.00[ASN][1000 genomes]
rs3130023	1.00[ASN][1000 genomes]
rs3130026	1.00[ASN][1000 genomes]
rs3130104	1.00[ASN][1000 genomes]
rs3130257	1.00[ASN][1000 genomes]
rs3130258	1.00[ASN][1000 genomes]
rs3130273	1.00[ASN][1000 genomes]
rs34897283	0.83[EUR][1000 genomes]
rs35700288	1.00[ASN][1000 genomes]
rs36003672	1.00[ASN][1000 genomes]
rs3843520	0.85[EUR][1000 genomes]
rs3843521	0.85[EUR][1000 genomes]
rs3857558	0.85[EUR][1000 genomes]
rs449978	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs4713629	0.84[EUR][1000 genomes]
rs4713630	0.84[EUR][1000 genomes]
rs4713631	0.85[EUR][1000 genomes]
rs4713633	0.85[EUR][1000 genomes]
rs4713634	1.00[ASN][1000 genomes]
rs6457728	0.86[EUR][1000 genomes]
rs6910219	0.83[EUR][1000 genomes]
rs7383692	0.86[EUR][1000 genomes]
rs7753266	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7762843	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap]
rs9368764	0.83[EUR][1000 genomes]
rs9368765	0.85[EUR][1000 genomes]
rs9368766	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830637	chr6:33329365-33510704	Flanking Active TSS Weak transcription Strong transcription Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	62 gene(s)	inside rSNPs	diseases
2	nsv602832	chr6:33382241-33520221	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
3	nsv521506	chr6:33468151-33480738	Weak transcription Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	nsv524010	chr6:33468151-33505981	Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:33453000-33474000	Weak transcription	Right Atrium	heart

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