Variant report

Variant	rs6914766
Chromosome Location	chr6:143421931-143421932
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr6:143421504-143421994	MCF-7	breast:	n/a	chr6:143421768-143421777 chr6:143421766-143421779 chr6:143421768-143421777 chr6:143421768-143421777
2	CEBPB	chr6:143421587-143421959	K562	blood:	n/a	chr6:143421768-143421777 chr6:143421766-143421779 chr6:143421768-143421777 chr6:143421768-143421777
3	CEBPB	chr6:143421587-143421955	HepG2	liver:	n/a	chr6:143421768-143421777 chr6:143421766-143421779 chr6:143421768-143421777 chr6:143421768-143421777
4	CEBPB	chr6:143421594-143421941	IMR90	lung:	n/a	chr6:143421768-143421777 chr6:143421766-143421779 chr6:143421768-143421777 chr6:143421768-143421777

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:143421246..143425129-chr6:143429361..143431906,3	K562	blood:
2	chr6:143380360..143383135-chr6:143419017..143422482,3	K562	blood:

Variant related genes	Relation type
ENSG00000225752	TF binding region
ENSG00000146416	Chromatin interaction

rs_ID	r²[population]
rs10452656	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17072213	1.00[EUR][1000 genomes]
rs2092238	1.00[EUR][1000 genomes]
rs2876548	1.00[EUR][1000 genomes]
rs56887572	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58798749	1.00[EUR][1000 genomes]
rs60445283	1.00[EUR][1000 genomes]
rs61171267	1.00[EUR][1000 genomes]
rs6570546	1.00[EUR][1000 genomes]
rs6906865	1.00[EUR][1000 genomes]
rs6907970	1.00[EUR][1000 genomes]
rs6925127	1.00[EUR][1000 genomes]
rs6932133	1.00[EUR][1000 genomes]
rs6937052	1.00[EUR][1000 genomes]
rs73777869	1.00[EUR][1000 genomes]
rs73777870	1.00[EUR][1000 genomes]
rs73777871	1.00[EUR][1000 genomes]
rs7748623	1.00[EUR][1000 genomes]

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143382600-143426800	Weak transcription	Ovary	ovary
2	chr6:143386400-143431800	Weak transcription	NHEK	skin
3	chr6:143389600-143437000	Weak transcription	HSMM	muscle
4	chr6:143395800-143432200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr6:143397400-143431600	Weak transcription	HMEC	breast
6	chr6:143404000-143422600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr6:143408600-143445400	Weak transcription	Aorta	Aorta
8	chr6:143408600-143452600	Weak transcription	Right Ventricle	heart
9	chr6:143417800-143427600	Weak transcription	Fetal Intestine Large	intestine
10	chr6:143417800-143445200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
11	chr6:143419000-143426000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr6:143419000-143427000	Weak transcription	Spleen	Spleen
13	chr6:143419200-143425800	Weak transcription	Fetal Intestine Small	intestine
14	chr6:143419200-143427800	Weak transcription	Small Intestine	intestine
15	chr6:143419400-143427400	Weak transcription	K562	blood
16	chr6:143419800-143431600	Weak transcription	Primary T cells from cord blood	blood
17	chr6:143419800-143432000	Weak transcription	Duodenum Mucosa	Duodenum
18	chr6:143421400-143427400	Weak transcription	Liver	Liver
19	chr6:143421400-143428600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr6:143421800-143422000	Enhancers	Monocytes-CD14+_RO01746	blood
21	chr6:143421800-143424800	Weak transcription	Brain Angular Gyrus	brain

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