Variant report

Variant	rs6925127
Chromosome Location	chr6:143429045-143429046
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:143427658..143429205-chr6:143429349..143432332,2	MCF-7	breast:
2	chr6:143427899..143429487-chr6:143435629..143437861,2	K562	blood:

rs_ID	r²[population]
rs10452656	1.00[EUR][1000 genomes]
rs17072213	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2092238	1.00[EUR][1000 genomes]
rs2876548	1.00[EUR][1000 genomes]
rs56887572	1.00[EUR][1000 genomes]
rs58798749	1.00[EUR][1000 genomes]
rs60445283	1.00[EUR][1000 genomes]
rs61171267	1.00[EUR][1000 genomes]
rs6570546	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6906865	1.00[EUR][1000 genomes]
rs6907970	1.00[EUR][1000 genomes]
rs6914766	1.00[EUR][1000 genomes]
rs6932133	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6937052	1.00[EUR][1000 genomes]
rs73777869	1.00[EUR][1000 genomes]
rs73777870	1.00[EUR][1000 genomes]
rs73777871	1.00[EUR][1000 genomes]
rs7748623	1.00[EUR][1000 genomes]

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143386400-143431800	Weak transcription	NHEK	skin
2	chr6:143389600-143437000	Weak transcription	HSMM	muscle
3	chr6:143395800-143432200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr6:143397400-143431600	Weak transcription	HMEC	breast
5	chr6:143408600-143445400	Weak transcription	Aorta	Aorta
6	chr6:143408600-143452600	Weak transcription	Right Ventricle	heart
7	chr6:143417800-143445200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
8	chr6:143419800-143431600	Weak transcription	Primary T cells from cord blood	blood
9	chr6:143419800-143432000	Weak transcription	Duodenum Mucosa	Duodenum
10	chr6:143422800-143441600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr6:143425000-143432600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr6:143425200-143429200	Weak transcription	HSMMtube	muscle
13	chr6:143425800-143429600	Weak transcription	Skeletal Muscle Male	skeletal muscle
14	chr6:143426200-143447400	Weak transcription	Brain Hippocampus Middle	brain
15	chr6:143426400-143431800	Weak transcription	NH-A	brain
16	chr6:143427200-143431600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr6:143427400-143430200	Enhancers	Adipose Nuclei	Adipose
18	chr6:143427400-143431200	Enhancers	Liver	Liver
19	chr6:143427600-143429600	Enhancers	Fetal Intestine Large	intestine
20	chr6:143427600-143429800	Enhancers	HepG2	liver
21	chr6:143427600-143431200	Weak transcription	Ovary	ovary
22	chr6:143427600-143451800	Weak transcription	Left Ventricle	heart
23	chr6:143427800-143429400	Enhancers	Fetal Intestine Small	intestine
24	chr6:143428000-143437800	Weak transcription	K562	blood
25	chr6:143428200-143430000	Enhancers	Fetal Lung	lung
26	chr6:143428200-143430200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
27	chr6:143428400-143429200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
28	chr6:143428400-143429200	Enhancers	Fetal Brain Male	brain
29	chr6:143428400-143452000	Weak transcription	Duodenum Smooth Muscle	Duodenum
30	chr6:143428600-143429400	Enhancers	Fetal Brain Female	brain
31	chr6:143428600-143429800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
32	chr6:143428600-143429800	Enhancers	Fetal Stomach	stomach
33	chr6:143428600-143430000	Enhancers	Osteobl	bone
34	chr6:143428600-143430200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
35	chr6:143428800-143429400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
36	chr6:143429000-143430000	Enhancers	Muscle Satellite Cultured Cells	--

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