Variant report

Variant rs6920448
Chromosome Location chr6:5755626-5755627
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:21 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:5727000-5762400 Weak transcription Stomach Smooth Muscle stomach
2 chr6:5753000-5756200 Weak transcription NH-A brain
3 chr6:5753000-5786000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr6:5753400-5761000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr6:5753400-5764200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr6:5753600-5757000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr6:5754600-5756000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr6:5754600-5757600 Weak transcription Psoas Muscle Psoas
9 chr6:5754600-5761000 Weak transcription Right Ventricle heart
10 chr6:5754600-5762600 Weak transcription Aorta Aorta
11 chr6:5754600-5763200 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr6:5754600-5764800 Weak transcription Gastric stomach
13 chr6:5754600-5771400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr6:5754800-5756400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr6:5754800-5757000 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr6:5754800-5767200 Weak transcription Fetal Intestine Small intestine
17 chr6:5754800-5771000 Weak transcription Pancreas Pancrea
18 chr6:5755000-5775600 Weak transcription Thymus Thymus
19 chr6:5755200-5761400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr6:5755200-5761400 Weak transcription Osteobl bone
21 chr6:5755600-5756400 Strong transcription Primary T cells from cord blood blood

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