Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:71738840..71742198-chr6:71742461..71746302,4	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1014877	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11759339	1.00[CHB][hapmap]
rs13210433	0.93[AFR][1000 genomes];0.98[EUR][1000 genomes]
rs1342761	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs16869607	1.00[CHB][hapmap]
rs2153911	0.93[AFR][1000 genomes];0.98[EUR][1000 genomes]
rs62404036	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6455400	0.95[AFR][1000 genomes];0.98[EUR][1000 genomes]
rs6455401	0.93[AFR][1000 genomes];0.98[EUR][1000 genomes]
rs6455402	0.95[AFR][1000 genomes];0.98[EUR][1000 genomes]
rs6907179	1.00[CHB][hapmap]
rs6911809	1.00[CHB][hapmap]
rs6924920	0.91[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs6929275	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7767485	0.93[AFR][1000 genomes];0.98[EUR][1000 genomes]
rs7774025	1.00[CHB][hapmap]
rs9342806	0.83[EUR][1000 genomes]
rs9346418	0.94[AFR][1000 genomes];0.97[EUR][1000 genomes]
rs9346419	0.95[AFR][1000 genomes];0.98[EUR][1000 genomes]
rs9351799	0.92[AFR][1000 genomes];0.97[EUR][1000 genomes]
rs9354961	1.00[CHB][hapmap]
rs9360434	0.86[EUR][1000 genomes]
rs9455303	0.80[AMR][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs6925100	COL19A1	cis	cerebellum	SCAN

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71740000-71744600	Enhancers	Fetal Lung	lung
2	chr6:71741400-71746200	Enhancers	Cortex derived primary cultured neurospheres	brain
3	chr6:71741600-71745400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr6:71741600-71745400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr6:71742000-71744400	Weak transcription	Brain Anterior Caudate	brain
6	chr6:71742200-71745000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr6:71742200-71745200	Enhancers	Brain Germinal Matrix	brain

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