Variant report

No.	Distal block	Cell Line	Cell type
1	chr6:147188602..147191328-chr6:147193777..147196284,2	MCF-7	breast:
2	chr6:147187679..147189723-chr6:147528707..147530987,2	K562	blood:
3	chr6:147154309..147156343-chr6:147188785..147190711,2	K562	blood:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1119876	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1122570	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1324683	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1324685	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1408575	0.88[ASN][1000 genomes]
rs1543548	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1924693	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2328769	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3818410	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6937015	0.85[ASN][1000 genomes]
rs7751561	0.87[ASN][1000 genomes]
rs7755795	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7766908	0.87[ASN][1000 genomes]
rs912581	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs927672	0.90[ASN][1000 genomes]
rs9377033	0.89[ASN][1000 genomes]
rs9377034	0.82[ASN][1000 genomes]
rs9390437	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9390438	0.87[ASN][1000 genomes]
rs9399588	0.83[ASN][1000 genomes]
rs9403826	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830838	chr6:147090745-147274669	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:147179600-147192200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr6:147182200-147197600	Weak transcription	Pancreas	Pancrea
3	chr6:147182800-147193000	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr6:147185400-147192000	Weak transcription	Primary monocytes fromperipheralblood	blood
5	chr6:147185800-147191200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr6:147186000-147191400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr6:147186200-147191600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
8	chr6:147186400-147192800	Weak transcription	Esophagus	oesophagus
9	chr6:147188200-147189800	Weak transcription	K562	blood
10	chr6:147189200-147190400	Enhancers	Liver	Liver

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