Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:24608901..24611617-chr6:24616065..24618620,2	K562	blood:
2	chr6:24614182..24617626-chr6:24618812..24622750,3	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10946726	1.00[JPT][hapmap]
rs16889581	1.00[JPT][hapmap]
rs17249952	1.00[JPT][hapmap]
rs2307300	1.00[CHB][hapmap]
rs2493334	1.00[JPT][hapmap]
rs2754771	1.00[JPT][hapmap]
rs2817741	1.00[JPT][hapmap]
rs2817743	1.00[JPT][hapmap]
rs6907640	1.00[JPT][hapmap]
rs6920675	1.00[JPT][hapmap]
rs73727344	0.89[ASN][1000 genomes]
rs73727345	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7743901	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7754175	1.00[CHB][hapmap]
rs7763865	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs9295629	1.00[JPT][hapmap]
rs9461051	1.00[JPT][hapmap]
rs9467250	1.00[JPT][hapmap]
rs9467261	1.00[JPT][hapmap]
rs9467265	1.00[JPT][hapmap]
rs9467266	1.00[JPT][hapmap]
rs9467267	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1020653	chr6:24557870-24638244	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:24612800-24616400	Enhancers	Fetal Brain Male	brain
2	chr6:24614400-24619200	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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