Variant report

Variant	rs6935870
Chromosome Location	chr6:134193248-134193249
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:134189717..134191560-chr6:134192198..134195026,2	K562	blood:

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10485158	1.00[ASN][1000 genomes]
rs11962472	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11962509	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11965014	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1577612	0.81[AMR][1000 genomes]
rs1577613	1.00[ASN][1000 genomes]
rs17062869	1.00[ASN][1000 genomes]
rs17062911	1.00[ASN][1000 genomes]
rs17062925	1.00[CHB][hapmap]
rs17062978	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs17062984	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17062987	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17062995	1.00[ASN][1000 genomes]
rs17063036	1.00[ASN][1000 genomes]
rs2146766	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2181548	1.00[ASN][1000 genomes]
rs2327424	0.81[AMR][1000 genomes]
rs41406249	0.83[LWK][hapmap]
rs4895997	1.00[ASN][1000 genomes]
rs4896002	1.00[ASN][1000 genomes]
rs4896003	1.00[ASN][1000 genomes]
rs4896004	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs4896005	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs4896009	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6899644	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6899722	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6906874	0.81[AMR][1000 genomes]
rs6917396	1.00[ASN][1000 genomes]
rs6923985	1.00[ASN][1000 genomes]
rs6925803	1.00[CHB][hapmap]
rs6932794	1.00[ASN][1000 genomes]
rs6935085	0.81[AMR][1000 genomes]
rs6940630	1.00[ASN][1000 genomes]
rs73774103	1.00[ASN][1000 genomes]
rs73774134	1.00[ASN][1000 genomes]
rs9493754	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34122	chr6:134089019-134378252	Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:134186600-134198000	Weak transcription	Fetal Lung	lung

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