Variant report

No.	Distal block	Cell Line	Cell type
1	chr7:27388390..27389956-chr7:27404431..27406421,2	MCF-7	breast:
2	chr7:27385251..27387696-chr7:27388686..27391421,2	K562	blood:
3	chr7:27389345..27391208-chr7:27395433..27397427,2	MCF-7	breast:
4	chr7:27385251..27387696-chr7:27388686..27392238,3	K562	blood:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10155834	0.81[CHB][hapmap]
rs10275933	0.83[CHB][hapmap]
rs10951158	0.81[CHB][hapmap]
rs11563997	0.93[CEU][hapmap];0.95[CHB][hapmap];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1158633	0.93[CEU][hapmap];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11765116	0.82[CHB][hapmap]
rs11765299	0.82[CHB][hapmap]
rs11767441	0.82[ASN][1000 genomes]
rs11772043	0.82[CHB][hapmap]
rs13238950	0.90[CHB][hapmap]
rs1547943	0.83[CHB][hapmap]
rs1990123	0.82[CHB][hapmap]
rs4719888	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4719890	0.91[CHB][hapmap]
rs4722686	0.82[CHB][hapmap]
rs4722687	0.82[CHB][hapmap]
rs4722688	0.91[CHB][hapmap]
rs4722689	0.83[CHB][hapmap]
rs4722692	0.82[CHB][hapmap];0.82[CHD][hapmap];0.86[JPT][hapmap];0.85[ASN][1000 genomes]
rs6945955	0.81[CHB][hapmap]
rs6952278	0.92[CEU][hapmap];0.95[CHB][hapmap]
rs6960719	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6971604	0.86[CHB][hapmap]
rs764560	0.82[CHB][hapmap]
rs7811453	0.82[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531024	chr7:27194426-27461954	Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	148 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:27387200-27390200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr7:27388800-27390200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr7:27389400-27390000	Enhancers	A549	lung

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