Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10088859	0.84[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs10092975	0.84[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs10098087	0.84[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs10098776	0.84[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs10102076	0.83[ASN][1000 genomes]
rs10104382	0.92[ASN][1000 genomes]
rs10110180	0.83[ASN][1000 genomes]
rs10112454	0.89[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs16930250	0.84[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs1897987	0.89[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs28708489	0.86[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs3924926	0.82[ASN][1000 genomes]
rs4074214	0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs56175034	0.92[ASN][1000 genomes]
rs58009465	0.85[ASN][1000 genomes]
rs6994169	0.87[ASN][1000 genomes]
rs7011915	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73684829	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs73686712	0.81[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs73686715	0.84[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7463230	0.83[ASN][1000 genomes]
rs892850	0.92[ASN][1000 genomes]
rs9657033	0.86[ASN][1000 genomes]
rs9792339	0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831342	chr8:64084331-64294941	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv890967	chr8:64107847-64454446	Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
3	esv1816645	chr8:64161544-64184282	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:64164400-64165400	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell

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