Variant report

Variant	rs6997505
Chromosome Location	chr8:79004739-79004740
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10957883	0.86[EUR][1000 genomes]
rs16939604	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs16939605	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs16939611	0.91[EUR][1000 genomes]
rs16939613	0.88[EUR][1000 genomes]
rs2128019	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs56080040	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62510273	0.81[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs62510274	0.81[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs6995312	0.85[EUR][1000 genomes]
rs72674515	0.89[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:78997000-79010000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr8:79003600-79005200	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr8:79004000-79005000	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr8:79004000-79005000	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr8:79004200-79004800	Enhancers	ES-I3 Cell Line	embryonic stem cell
6	chr8:79004200-79005000	Enhancers	H1 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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