Variant report

Variant	rs7003636
Chromosome Location	chr8:49313862-49313863
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:49311649..49313172-chr8:49313424..49316373,2	MCF-7	breast:
2	chr8:49306975..49309919-chr8:49310185..49313879,3	MCF-7	breast:

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10094661	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10097514	0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10107550	0.98[AFR][1000 genomes];0.88[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs10109005	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10109710	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11784649	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11984473	0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11991365	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13439723	0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs16936586	0.84[ASN][1000 genomes]
rs28669917	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28696798	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6992483	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9298006	0.91[AFR][1000 genomes];0.82[EUR][1000 genomes]

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49307000-49315200	Enhancers	Fetal Brain Male	brain
2	chr8:49308800-49315200	Enhancers	Fetal Heart	heart
3	chr8:49309000-49314200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr8:49309600-49315400	Enhancers	Ovary	ovary
5	chr8:49309800-49320200	Weak transcription	Aorta	Aorta
6	chr8:49310000-49314000	Enhancers	Left Ventricle	heart
7	chr8:49310000-49315200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr8:49310000-49316000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
9	chr8:49310200-49315000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr8:49310200-49315000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr8:49310400-49315400	Enhancers	Fetal Muscle Leg	muscle
12	chr8:49311000-49314400	Weak transcription	Colon Smooth Muscle	Colon
13	chr8:49311000-49315000	Weak transcription	Esophagus	oesophagus
14	chr8:49311000-49319400	Weak transcription	Gastric	stomach
15	chr8:49311000-49320000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
16	chr8:49311200-49318800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr8:49312200-49315000	Weak transcription	Fetal Thymus	thymus
18	chr8:49312400-49314600	Weak transcription	Placenta Amnion	Placenta Amnion
19	chr8:49312600-49314200	Enhancers	Lung	lung
20	chr8:49312600-49318800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr8:49312800-49318600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
22	chr8:49312800-49318800	Weak transcription	NH-A	brain
23	chr8:49313000-49319400	Weak transcription	Skeletal Muscle Male	skeletal muscle
24	chr8:49313000-49320200	Weak transcription	Placenta	Placenta
25	chr8:49313200-49314000	Weak transcription	Spleen	Spleen
26	chr8:49313200-49314600	Weak transcription	Fetal Stomach	stomach
27	chr8:49313200-49316000	Enhancers	Fetal Lung	lung
28	chr8:49313600-49314000	Bivalent Enhancer	Fetal Muscle Trunk	muscle
29	chr8:49313600-49315800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
30	chr8:49313800-49314000	Enhancers	Right Ventricle	heart
31	chr8:49313800-49314200	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
32	chr8:49313800-49315400	Enhancers	Breast Myoepithelial Primary Cells	Breast
33	chr8:49313800-49319400	Weak transcription	Right Atrium	heart

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