Variant report

Variant	rs7013888
Chromosome Location	chr8:67790247-67790248
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11991444	0.87[AFR][1000 genomes]
rs11995086	0.82[YRI][hapmap]
rs11995838	0.90[YRI][hapmap];0.87[AFR][1000 genomes]
rs11997452	0.84[YRI][hapmap]
rs35871529	0.90[YRI][hapmap];0.83[AFR][1000 genomes]
rs55878601	1.00[AFR][1000 genomes]
rs59037712	0.87[AFR][1000 genomes]
rs61559694	0.87[AFR][1000 genomes]
rs6996635	0.95[AFR][1000 genomes]
rs7007783	0.95[AFR][1000 genomes]
rs7011698	0.82[YRI][hapmap]
rs73691152	1.00[AFR][1000 genomes]
rs73691160	0.87[AFR][1000 genomes]
rs73691181	0.87[AFR][1000 genomes]
rs73691184	0.87[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1026746	chr8:67639626-67794164	ZNF genes & repeats Weak transcription Flanking Active TSS Strong transcription Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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