Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:16080117..16082951-chr9:16084939..16087066,2	K562	blood:
2	chr9:16080126..16081905-chr9:16084168..16087016,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10217349	0.83[EUR][1000 genomes]
rs10962276	0.84[EUR][1000 genomes]
rs11999853	0.85[EUR][1000 genomes]
rs12000112	0.84[EUR][1000 genomes]
rs12000547	0.82[EUR][1000 genomes]
rs12005226	0.80[EUR][1000 genomes]
rs12683161	0.82[EUR][1000 genomes]
rs12684961	0.81[EUR][1000 genomes]
rs1887677	0.83[AFR][1000 genomes];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1887679	0.86[EUR][1000 genomes]
rs2891006	0.82[EUR][1000 genomes]
rs4961645	0.83[EUR][1000 genomes]
rs4961647	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4961648	0.83[EUR][1000 genomes]
rs4961659	0.85[EUR][1000 genomes]
rs61340625	0.80[EUR][1000 genomes]
rs62552194	0.84[EUR][1000 genomes]
rs62552198	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs62552205	0.82[EUR][1000 genomes]
rs7023221	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7042667	0.82[ASN][1000 genomes]
rs7048148	0.83[EUR][1000 genomes]
rs7863779	0.84[EUR][1000 genomes]
rs7872656	0.85[EUR][1000 genomes]
rs943783	0.80[EUR][1000 genomes]
rs943784	0.86[EUR][1000 genomes]
rs943786	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9695984	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949463	chr9:15970668-16377360	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv831521	chr9:15974174-16106565	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	esv2761506	chr9:16040491-16093736	Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:16085000-16085800	Enhancers	Adipose Nuclei	Adipose
2	chr9:16085200-16086000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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