Variant report

Variant	rs7067622
Chromosome Location	chr10:93364173-93364174
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:93362637..93365388-chr10:93371389..93374177,2	MCF-7	breast:
2	chr10:93363309..93366261-chr10:93366366..93368768,3	K562	blood:
3	chr10:93347598..93350963-chr10:93361481..93364970,4	K562	blood:
4	chr10:93362065..93364214-chr10:93385412..93387121,2	MCF-7	breast:

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10748561	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10748562	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11595816	0.90[ASN][1000 genomes]
rs1857059	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2010902	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2421615	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.80[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2421617	0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4313484	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4313485	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4329593	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4331000	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4514319	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4933211	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs57867863	0.90[ASN][1000 genomes]
rs7083815	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7101314	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs724585	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs724586	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs748400	0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs748402	0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7902087	0.90[ASN][1000 genomes]
rs7911809	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:53 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:93354600-93364800	Enhancers	Skeletal Muscle Female	skeletal muscle
2	chr10:93357600-93368000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr10:93357800-93367600	Weak transcription	Brain Hippocampus Middle	brain
4	chr10:93358400-93366400	Enhancers	Hela-S3	cervix
5	chr10:93358400-93367600	Weak transcription	Brain Anterior Caudate	brain
6	chr10:93361000-93367400	Weak transcription	Psoas Muscle	Psoas
7	chr10:93361200-93366400	Enhancers	Fetal Heart	heart
8	chr10:93361800-93364800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr10:93361800-93365600	Enhancers	HSMM	muscle
10	chr10:93362000-93365400	Enhancers	Breast Myoepithelial Primary Cells	Breast
11	chr10:93362000-93365400	Enhancers	HSMMtube	muscle
12	chr10:93362200-93364200	Enhancers	Muscle Satellite Cultured Cells	--
13	chr10:93362200-93365400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
14	chr10:93362200-93365400	Enhancers	Fetal Lung	lung
15	chr10:93362400-93364800	Enhancers	Left Ventricle	heart
16	chr10:93362400-93365600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
17	chr10:93362400-93365600	Enhancers	Fetal Stomach	stomach
18	chr10:93362600-93364800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
19	chr10:93362600-93365200	Enhancers	Placenta Amnion	Placenta Amnion
20	chr10:93362800-93364200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr10:93362800-93367600	Weak transcription	Right Ventricle	heart
22	chr10:93363000-93365400	Enhancers	NHEK	skin
23	chr10:93363200-93364400	Enhancers	Ovary	ovary
24	chr10:93363200-93364400	Enhancers	HUVEC	blood vessel
25	chr10:93363200-93365600	Enhancers	NHLF	lung
26	chr10:93363200-93365800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
27	chr10:93363400-93364600	Enhancers	Gastric	stomach
28	chr10:93363400-93365200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
29	chr10:93363400-93365200	Enhancers	Liver	Liver
30	chr10:93363400-93365400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
31	chr10:93363400-93365600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
32	chr10:93363400-93365600	Enhancers	Osteobl	bone
33	chr10:93363600-93364400	Enhancers	NH-A	brain
34	chr10:93363600-93364400	Enhancers	NHDF-Ad	bronchial
35	chr10:93363600-93364600	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
36	chr10:93363600-93365000	Flanking Active TSS	A549	lung
37	chr10:93363600-93365200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
38	chr10:93363600-93365600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
39	chr10:93363800-93364200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
40	chr10:93363800-93364200	Enhancers	Skeletal Muscle Male	skeletal muscle
41	chr10:93363800-93365000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
42	chr10:93363800-93365000	Enhancers	Stomach Smooth Muscle	stomach
43	chr10:93363800-93365400	Enhancers	Duodenum Smooth Muscle	Duodenum
44	chr10:93363800-93365400	Enhancers	Rectal Smooth Muscle	rectum
45	chr10:93363800-93365400	Enhancers	HMEC	breast
46	chr10:93363800-93367400	Weak transcription	Pancreas	Pancrea
47	chr10:93363800-93367600	Weak transcription	Brain Cingulate Gyrus	brain
48	chr10:93364000-93364400	Flanking Active TSS	Fetal Kidney	kidney
49	chr10:93364000-93364600	Weak transcription	Fetal Intestine Small	intestine
50	chr10:93364000-93365400	Enhancers	Colon Smooth Muscle	Colon

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