Variant report

Variant	rs748400
Chromosome Location	chr10:93363681-93363682
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:93362637..93365388-chr10:93371389..93374177,2	MCF-7	breast:
2	chr10:93363309..93366261-chr10:93366366..93368768,3	K562	blood:
3	chr10:93347598..93350963-chr10:93361481..93364970,4	K562	blood:
4	chr10:93348521..93350817-chr10:93361481..93363972,2	K562	blood:
5	chr10:93362065..93364214-chr10:93385412..93387121,2	MCF-7	breast:

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10748561	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10748562	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11595816	0.92[ASN][1000 genomes]
rs1857059	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2010902	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2421615	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2421617	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4313484	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4313485	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4329593	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4331000	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4514319	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4933211	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57867863	0.92[ASN][1000 genomes]
rs7067622	0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7083815	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7101314	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs724585	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs724586	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs748402	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7902087	0.92[ASN][1000 genomes]
rs7911809	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:55 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:93354600-93364800	Enhancers	Skeletal Muscle Female	skeletal muscle
2	chr10:93357600-93368000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr10:93357800-93367600	Weak transcription	Brain Hippocampus Middle	brain
4	chr10:93358400-93363800	Weak transcription	Duodenum Smooth Muscle	Duodenum
5	chr10:93358400-93366400	Enhancers	Hela-S3	cervix
6	chr10:93358400-93367600	Weak transcription	Brain Anterior Caudate	brain
7	chr10:93358600-93364000	Weak transcription	Colon Smooth Muscle	Colon
8	chr10:93359400-93363800	Weak transcription	HMEC	breast
9	chr10:93361000-93363800	Weak transcription	Skeletal Muscle Male	skeletal muscle
10	chr10:93361000-93367400	Weak transcription	Psoas Muscle	Psoas
11	chr10:93361200-93366400	Enhancers	Fetal Heart	heart
12	chr10:93361800-93364800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr10:93361800-93365600	Enhancers	HSMM	muscle
14	chr10:93362000-93365400	Enhancers	Breast Myoepithelial Primary Cells	Breast
15	chr10:93362000-93365400	Enhancers	HSMMtube	muscle
16	chr10:93362200-93364000	Enhancers	HepG2	liver
17	chr10:93362200-93364200	Enhancers	Muscle Satellite Cultured Cells	--
18	chr10:93362200-93365400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr10:93362200-93365400	Enhancers	Fetal Lung	lung
20	chr10:93362400-93363800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
21	chr10:93362400-93364800	Enhancers	Left Ventricle	heart
22	chr10:93362400-93365600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
23	chr10:93362400-93365600	Enhancers	Fetal Stomach	stomach
24	chr10:93362600-93363800	Weak transcription	Rectal Smooth Muscle	rectum
25	chr10:93362600-93364800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
26	chr10:93362600-93365200	Enhancers	Placenta Amnion	Placenta Amnion
27	chr10:93362800-93363800	Weak transcription	Stomach Smooth Muscle	stomach
28	chr10:93362800-93364000	Enhancers	Fetal Kidney	kidney
29	chr10:93362800-93364200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr10:93362800-93367600	Weak transcription	Right Ventricle	heart
31	chr10:93363000-93364000	Enhancers	Aorta	Aorta
32	chr10:93363000-93365400	Enhancers	NHEK	skin
33	chr10:93363200-93364400	Enhancers	Ovary	ovary
34	chr10:93363200-93364400	Enhancers	HUVEC	blood vessel
35	chr10:93363200-93365600	Enhancers	NHLF	lung
36	chr10:93363200-93365800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
37	chr10:93363400-93363800	Enhancers	Esophagus	oesophagus
38	chr10:93363400-93363800	Enhancers	Lung	lung
39	chr10:93363400-93363800	Enhancers	Pancreas	Pancrea
40	chr10:93363400-93363800	Weak transcription	Stomach Mucosa	stomach
41	chr10:93363400-93364000	Enhancers	Right Atrium	heart
42	chr10:93363400-93364600	Enhancers	Gastric	stomach
43	chr10:93363400-93365200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
44	chr10:93363400-93365200	Enhancers	Liver	Liver
45	chr10:93363400-93365400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
46	chr10:93363400-93365600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
47	chr10:93363400-93365600	Enhancers	Osteobl	bone
48	chr10:93363600-93363800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
49	chr10:93363600-93363800	Enhancers	Fetal Intestine Small	intestine
50	chr10:93363600-93364400	Enhancers	NH-A	brain

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