Variant report

Variant	rs7077890
Chromosome Location	chr10:25531108-25531109
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10128299	1.00[CEU][hapmap];0.80[AFR][1000 genomes]
rs10508690	1.00[CEU][hapmap];0.83[AFR][1000 genomes]
rs11014436	1.00[CEU][hapmap]
rs11014454	1.00[CEU][hapmap];0.85[YRI][hapmap]
rs11014475	1.00[CEU][hapmap]
rs11014480	1.00[CEU][hapmap]
rs11014525	1.00[CEU][hapmap]
rs12250636	1.00[CEU][hapmap]
rs12258880	1.00[CEU][hapmap]
rs12263407	1.00[CEU][hapmap]
rs12265296	1.00[CEU][hapmap]
rs12265550	1.00[CEU][hapmap]
rs1339997	1.00[CEU][hapmap]
rs16925493	1.00[CEU][hapmap];0.85[YRI][hapmap]
rs16925518	1.00[CEU][hapmap];0.83[AFR][1000 genomes]
rs7074602	1.00[CEU][hapmap];0.82[YRI][hapmap]
rs7075587	1.00[CEU][hapmap]
rs7080343	1.00[CEU][hapmap]
rs7090132	1.00[CEU][hapmap]
rs7101272	1.00[CEU][hapmap]
rs7902783	1.00[CEU][hapmap]
rs7903171	1.00[CEU][hapmap]
rs7906676	1.00[CEU][hapmap]
rs7918295	1.00[CEU][hapmap]
rs9988788	1.00[CEU][hapmap];0.83[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2761583	chr10:25525657-25722444	Weak transcription Enhancers ZNF genes & repeats Active TSS Strong transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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