Variant report

Variant	rs707869
Chromosome Location	chr6:24312184-24312185
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:24301531..24305214-chr6:24307233..24312896,5	K562	blood:

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs12110558	1.00[ASN][1000 genomes]
rs12111422	1.00[ASN][1000 genomes]
rs16889038	1.00[ASN][1000 genomes]
rs16889066	1.00[ASN][1000 genomes]
rs2066215	1.00[ASN][1000 genomes]
rs3843516	1.00[ASN][1000 genomes]
rs4712820	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57703909	1.00[ASN][1000 genomes]
rs61209944	1.00[ASN][1000 genomes]
rs62400388	1.00[ASN][1000 genomes]
rs62400408	1.00[ASN][1000 genomes]
rs62400409	1.00[ASN][1000 genomes]
rs62400419	1.00[ASN][1000 genomes]
rs6911191	1.00[ASN][1000 genomes]
rs6912221	1.00[ASN][1000 genomes]
rs6917481	1.00[ASN][1000 genomes]
rs707861	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs707863	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs707864	0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs707865	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs707866	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs707867	0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs707868	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72833033	1.00[ASN][1000 genomes]
rs72833035	1.00[ASN][1000 genomes]
rs73396035	1.00[ASN][1000 genomes]
rs7753708	1.00[ASN][1000 genomes]
rs7753917	1.00[ASN][1000 genomes]
rs807685	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs807686	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs807687	0.86[EUR][1000 genomes]
rs807688	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs807690	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs807691	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs807692	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs807704	1.00[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:24308400-24313600	Weak transcription	Fetal Kidney	kidney
2	chr6:24308400-24313800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr6:24309800-24312800	Enhancers	A549	lung
4	chr6:24311000-24312200	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
5	chr6:24311800-24312400	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
6	chr6:24312000-24312200	ZNF genes & repeats	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr6:24312000-24312200	ZNF genes & repeats	HSMMtube	muscle
8	chr6:24312000-24312400	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
9	chr6:24312000-24312600	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr6:24312000-24312600	ZNF genes & repeats	Fetal Intestine Small	intestine
11	chr6:24312000-24312800	Weak transcription	HepG2	liver
12	chr6:24312000-24313800	Enhancers	ES-I3 Cell Line	embryonic stem cell

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