The 2.0 version of rSNPBase

Variant report

Variant rs7124590
Chromosome Location chr11:58361506-58361507
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:58347600-58379600 Weak transcription Pancreas Pancrea
2 chr11:58347600-58379800 Weak transcription Lung lung
3 chr11:58347600-58380200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr11:58347800-58377200 Weak transcription Fetal Muscle Trunk muscle
5 chr11:58347800-58380200 Weak transcription Aorta Aorta
6 chr11:58348200-58377400 Weak transcription Fetal Kidney kidney
7 chr11:58349200-58363200 Weak transcription Brain Germinal Matrix brain
8 chr11:58349200-58377400 Weak transcription HSMMtube muscle
9 chr11:58349200-58379600 Weak transcription Spleen Spleen
10 chr11:58349200-58380600 Weak transcription Fetal Brain Male brain
11 chr11:58349200-58384200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr11:58349200-58384800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr11:58349400-58367600 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr11:58349600-58364200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr11:58349600-58368200 Weak transcription Brain Anterior Caudate brain
16 chr11:58351000-58367800 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr11:58351200-58378200 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr11:58352000-58368400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr11:58352600-58379600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr11:58352800-58361800 Strong transcription Dnd41 blood
21 chr11:58353400-58367600 Weak transcription Hela-S3 cervix
22 chr11:58353600-58364400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr11:58354200-58364400 Weak transcription Primary neutrophils fromperipheralblood blood
24 chr11:58354600-58377400 Weak transcription Fetal Brain Female brain
25 chr11:58354800-58376800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr11:58355000-58363200 Weak transcription Primary T cells fromperipheralblood blood
27 chr11:58355000-58366800 Strong transcription Monocytes-CD14+_RO01746 blood
28 chr11:58355000-58367000 Weak transcription Primary hematopoietic stem cells blood
29 chr11:58355000-58377200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr11:58355000-58377200 Weak transcription NH-A brain
31 chr11:58355400-58361600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr11:58355600-58362400 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr11:58355600-58368000 Weak transcription Brain Angular Gyrus brain
34 chr11:58357200-58377200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr11:58357800-58365000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr11:58358600-58364400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr11:58358800-58361800 Strong transcription Primary B cells from cord blood blood
38 chr11:58359000-58361600 Enhancers Liver Liver
39 chr11:58359000-58361800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr11:58359200-58361600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr11:58359200-58362000 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr11:58359200-58362200 Strong transcription HUES48 Cell Line embryonic stem cell
43 chr11:58359200-58363400 Enhancers Duodenum Mucosa Duodenum
44 chr11:58359400-58366400 Weak transcription iPS-18 Cell Line embryonic stem cell
45 chr11:58359600-58361800 Genic enhancers HepG2 liver
46 chr11:58359800-58362200 Strong transcription Primary B cells from peripheral blood blood
47 chr11:58360000-58361800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
48 chr11:58360000-58362200 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr11:58360000-58362200 Genic enhancers A549 lung
50 chr11:58360000-58362400 Weak transcription Small Intestine intestine

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Last update: Aug 31, 2015