Variant report

Variant	rs71309946
Chromosome Location	chr3:56343274-56343275
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:56341386..56344229-chr3:56362146..56365044,2	K562	blood:
2	chr3:56338889..56341193-chr3:56342498..56344708,2	K562	blood:

rs_ID	r²[population]
rs1078309	0.88[EUR][1000 genomes]
rs1078310	0.88[EUR][1000 genomes]
rs11926826	0.88[EUR][1000 genomes]
rs12486948	0.88[EUR][1000 genomes]
rs12487839	0.86[EUR][1000 genomes]
rs12490280	0.88[EUR][1000 genomes]
rs12491217	0.88[EUR][1000 genomes]
rs12492055	0.88[EUR][1000 genomes]
rs12492253	0.88[EUR][1000 genomes]
rs12494857	0.86[EUR][1000 genomes]
rs12496048	1.00[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs13100994	1.00[AFR][1000 genomes]
rs1352012	0.86[EUR][1000 genomes]
rs17056646	0.88[EUR][1000 genomes]
rs17288728	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17732598	0.88[EUR][1000 genomes]
rs2167617	0.97[EUR][1000 genomes]
rs2316481	0.86[EUR][1000 genomes]
rs2316482	0.86[EUR][1000 genomes]
rs35431468	0.88[EUR][1000 genomes]
rs35995295	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4974120	0.88[EUR][1000 genomes]
rs4974121	0.88[EUR][1000 genomes]
rs4974123	0.88[EUR][1000 genomes]
rs4974130	0.97[EUR][1000 genomes]
rs4974170	0.86[EUR][1000 genomes]
rs4974171	0.86[EUR][1000 genomes]
rs4974173	0.86[EUR][1000 genomes]
rs4974176	0.88[EUR][1000 genomes]
rs4974179	0.88[EUR][1000 genomes]
rs4974180	0.88[EUR][1000 genomes]
rs4974196	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs55849756	0.88[EUR][1000 genomes]
rs56004380	0.97[EUR][1000 genomes]
rs58413645	0.97[EUR][1000 genomes]
rs59079055	0.88[EUR][1000 genomes]
rs60383545	0.88[EUR][1000 genomes]
rs60384923	0.88[EUR][1000 genomes]
rs61689518	0.86[EUR][1000 genomes]
rs6763791	0.86[EUR][1000 genomes]
rs6764295	0.86[EUR][1000 genomes]
rs6780051	0.86[EUR][1000 genomes]
rs6782034	0.88[EUR][1000 genomes]
rs6783356	0.88[EUR][1000 genomes]
rs6786058	0.88[EUR][1000 genomes]
rs6788949	0.86[EUR][1000 genomes]
rs6789409	0.97[EUR][1000 genomes]
rs6801342	0.86[EUR][1000 genomes]
rs6803165	0.88[EUR][1000 genomes]
rs6804221	0.88[EUR][1000 genomes]
rs6810099	0.86[EUR][1000 genomes]
rs71309948	1.00[AFR][1000 genomes]
rs72870171	0.86[EUR][1000 genomes]
rs72870196	0.86[EUR][1000 genomes]
rs73834604	0.88[EUR][1000 genomes]
rs755321	0.88[EUR][1000 genomes]
rs7613726	0.88[EUR][1000 genomes]
rs7650293	0.88[EUR][1000 genomes]
rs977313	0.88[EUR][1000 genomes]

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:56337800-56344200	Weak transcription	Fetal Muscle Leg	muscle
2	chr3:56338200-56343400	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr3:56338400-56343400	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr3:56338800-56343600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chr3:56341400-56344200	Enhancers	Fetal Stomach	stomach
6	chr3:56341800-56343800	Enhancers	Fetal Heart	heart
7	chr3:56342600-56343800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr3:56342600-56343800	Enhancers	Colon Smooth Muscle	Colon
9	chr3:56342600-56343800	Enhancers	Rectal Smooth Muscle	rectum
10	chr3:56343200-56344000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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