The 2.0 version of rSNPBase

Variant report

Variant rs71371407
Chromosome Location chr17:38204827-38204828
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:38186600-38209800 Weak transcription Small Intestine intestine
2 chr17:38188800-38209400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr17:38189600-38206600 Weak transcription H9 Cell Line embryonic stem cell
4 chr17:38189600-38209600 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr17:38189600-38209600 Weak transcription Psoas Muscle Psoas
6 chr17:38190600-38209600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr17:38191000-38208800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr17:38191800-38206000 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr17:38192000-38209600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr17:38192200-38206600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr17:38192200-38209400 Weak transcription Fetal Brain Male brain
12 chr17:38192200-38209600 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr17:38192400-38209600 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr17:38192400-38209600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr17:38192400-38209600 Weak transcription Colonic Mucosa Colon
16 chr17:38192400-38209800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr17:38192400-38210000 Weak transcription Placenta Amnion Placenta Amnion
18 chr17:38192600-38205600 Weak transcription Spleen Spleen
19 chr17:38192600-38206600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr17:38192600-38206600 Weak transcription Primary T helper cells PMA-I stimulated --
21 chr17:38192600-38208600 Weak transcription NHEK skin
22 chr17:38192600-38209400 Weak transcription Primary hematopoietic stem cells blood
23 chr17:38192600-38209800 Weak transcription Aorta Aorta
24 chr17:38193600-38208600 Weak transcription K562 blood
25 chr17:38193800-38206600 Weak transcription Esophagus oesophagus
26 chr17:38195400-38206400 Weak transcription Ovary ovary
27 chr17:38195400-38209600 Weak transcription Pancreas Pancrea
28 chr17:38195600-38206400 Weak transcription Brain Inferior Temporal Lobe brain
29 chr17:38195600-38206600 Weak transcription Brain Cingulate Gyrus brain
30 chr17:38195600-38206600 Weak transcription Brain Substantia Nigra brain
31 chr17:38195600-38206600 Weak transcription A549 lung
32 chr17:38195600-38206600 Weak transcription HMEC breast
33 chr17:38195600-38208000 Weak transcription Fetal Kidney kidney
34 chr17:38195600-38208600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
35 chr17:38195600-38209400 Weak transcription Hela-S3 cervix
36 chr17:38195800-38205000 Weak transcription Stomach Smooth Muscle stomach
37 chr17:38195800-38206400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr17:38195800-38206600 Weak transcription iPS-20b Cell Line embryonic stem cell
39 chr17:38195800-38206600 Weak transcription Brain Germinal Matrix brain
40 chr17:38195800-38206600 Weak transcription Brain Hippocampus Middle brain
41 chr17:38195800-38206600 Weak transcription Left Ventricle heart
42 chr17:38195800-38206800 Weak transcription iPS-18 Cell Line embryonic stem cell
43 chr17:38195800-38208400 Weak transcription Muscle Satellite Cultured Cells --
44 chr17:38195800-38208800 Weak transcription NHLF lung
45 chr17:38195800-38209400 Weak transcription Stomach Mucosa stomach
46 chr17:38195800-38209600 Weak transcription Fetal Heart heart
47 chr17:38195800-38209800 Weak transcription ES-I3 Cell Line embryonic stem cell
48 chr17:38196000-38205400 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr17:38196000-38205400 Weak transcription NH-A brain
50 chr17:38196000-38206600 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015