Variant report

Variant	rs71558975
Chromosome Location	chr6:82485369-82485370
allele	CTCAAACACCA/TTCAAACACC
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs1000276	0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12524158	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs194611	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs194615	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6924759	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6928409	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6929407	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6941969	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9344221	0.96[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9353027	0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82474200-82485800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr6:82477600-82485400	Weak transcription	Placenta	Placenta
3	chr6:82480400-82485800	Weak transcription	Primary neutrophils fromperipheralblood	blood
4	chr6:82483000-82487400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr6:82483000-82487400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr6:82483000-82497400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr6:82483200-82485600	Weak transcription	Primary monocytes fromperipheralblood	blood
8	chr6:82483600-82485600	Weak transcription	Monocytes-CD14+_RO01746	blood
9	chr6:82483800-82485800	Weak transcription	Hela-S3	cervix
10	chr6:82484400-82488400	Enhancers	HepG2	liver
11	chr6:82485200-82485600	Weak transcription	Liver	Liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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