Variant report

Variant	rs9344221
Chromosome Location	chr6:82486646-82486647
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs1000276	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12524158	0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs194611	0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs194615	0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6924759	0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6928409	0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6929407	0.98[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6941969	0.98[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs71558975	0.96[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9353027	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82483000-82487400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr6:82483000-82487400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr6:82483000-82497400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr6:82484400-82488400	Enhancers	HepG2	liver
5	chr6:82485600-82486800	Enhancers	Monocytes-CD14+_RO01746	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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