Variant report
| Variant | rs71648404 |
|---|---|
| Chromosome Location | chr1:227085738-227085739 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:227059800-227095000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 2 | chr1:227069400-227087800 | Weak transcription | HMEC | breast |
| 3 | chr1:227069400-227102800 | Weak transcription | K562 | blood |
| 4 | chr1:227070800-227088200 | Weak transcription | Fetal Brain Male | brain |
| 5 | chr1:227071000-227089000 | Strong transcription | Stomach Smooth Muscle | stomach |
| 6 | chr1:227071200-227086800 | Weak transcription | NHDF-Ad | bronchial |
| 7 | chr1:227071200-227088400 | Weak transcription | Hela-S3 | cervix |
| 8 | chr1:227071200-227091400 | Weak transcription | Osteobl | bone |
| 9 | chr1:227071600-227087000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 10 | chr1:227071800-227102400 | Weak transcription | Small Intestine | intestine |
| 11 | chr1:227072200-227087000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 12 | chr1:227072200-227091800 | Weak transcription | Fetal Kidney | kidney |
| 13 | chr1:227072200-227100400 | Weak transcription | Stomach Mucosa | stomach |
| 14 | chr1:227073400-227088600 | Strong transcription | Fetal Stomach | stomach |
| 15 | chr1:227073400-227092200 | Strong transcription | Pancreas | Pancrea |
| 16 | chr1:227073800-227100600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 17 | chr1:227074200-227091800 | Weak transcription | Fetal Heart | heart |
| 18 | chr1:227074800-227090000 | Weak transcription | Primary B cells from peripheral blood | blood |
| 19 | chr1:227074800-227090200 | Strong transcription | Duodenum Smooth Muscle | Duodenum |
| 20 | chr1:227075000-227087400 | Weak transcription | Primary B cells from cord blood | blood |
| 21 | chr1:227075000-227088800 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 22 | chr1:227075200-227087000 | Weak transcription | GM12878-XiMat | blood |
| 23 | chr1:227075200-227091800 | Weak transcription | Right Atrium | heart |
| 24 | chr1:227075400-227088800 | Strong transcription | Liver | Liver |
| 25 | chr1:227075600-227088200 | Strong transcription | Brain Inferior Temporal Lobe | brain |
| 26 | chr1:227076600-227087400 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 27 | chr1:227078600-227091600 | Weak transcription | Primary hematopoietic stem cells | blood |
| 28 | chr1:227079000-227087200 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 29 | chr1:227079800-227097200 | Weak transcription | Brain Germinal Matrix | brain |
| 30 | chr1:227080000-227094800 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 31 | chr1:227080200-227087200 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 32 | chr1:227080200-227090600 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 33 | chr1:227080400-227087400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 34 | chr1:227080400-227088200 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 35 | chr1:227080400-227090000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 36 | chr1:227080600-227087400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 37 | chr1:227080600-227088400 | Strong transcription | Left Ventricle | heart |
| 38 | chr1:227080600-227088800 | Strong transcription | Adipose Nuclei | Adipose |
| 39 | chr1:227080600-227089000 | Strong transcription | Skeletal Muscle Male | skeletal muscle |
| 40 | chr1:227080600-227089800 | Strong transcription | Fetal Muscle Trunk | muscle |
| 41 | chr1:227080800-227093600 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 42 | chr1:227081000-227088800 | Strong transcription | Fetal Muscle Leg | muscle |
| 43 | chr1:227081600-227087200 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 44 | chr1:227081800-227089200 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 45 | chr1:227082400-227091000 | Weak transcription | NHLF | lung |
| 46 | chr1:227082600-227089000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 47 | chr1:227082800-227089000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 48 | chr1:227082800-227110600 | Weak transcription | Fetal Brain Female | brain |
| 49 | chr1:227083000-227086600 | Weak transcription | Colon Smooth Muscle | Colon |
| 50 | chr1:227083000-227087000 | Weak transcription | Psoas Muscle | Psoas |
