Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11488925	0.84[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13330482	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13331393	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13337136	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13339247	1.00[EUR][1000 genomes]
rs16972708	1.00[EUR][1000 genomes]
rs16973325	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16973352	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16973364	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28455032	0.84[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28693064	1.00[EUR][1000 genomes]
rs58909593	1.00[EUR][1000 genomes]
rs59258436	0.84[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6499524	1.00[EUR][1000 genomes]
rs73571723	1.00[EUR][1000 genomes]
rs73584838	1.00[EUR][1000 genomes]
rs73584840	1.00[EUR][1000 genomes]
rs74025967	1.00[EUR][1000 genomes]
rs8051528	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9921203	1.00[EUR][1000 genomes]
rs9927182	1.00[EUR][1000 genomes]
rs9931828	0.82[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9932769	0.80[AFR][1000 genomes]
rs9939332	0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3347477	chr16:71555148-71985177	Weak transcription Active TSS Flanking Active TSS Strong transcription Enhancers Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
2	nsv1063338	chr16:71612346-71752968	Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:71630400-71634400	Weak transcription	Liver	Liver
2	chr16:71632600-71633400	Enhancers	HepG2	liver
3	chr16:71632600-71634800	Weak transcription	A549	lung

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