Variant report

Variant rs7248259
Chromosome Location chr19:53308964-53308965
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53294600-53311400 ZNF genes & repeats Liver Liver
2 chr19:53296200-53324000 Weak transcription Fetal Brain Male brain
3 chr19:53297400-53314000 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
4 chr19:53299200-53311400 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr19:53299200-53314000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr19:53299200-53314000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
7 chr19:53299200-53314000 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
8 chr19:53299200-53314000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr19:53299600-53314000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr19:53299600-53314000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
11 chr19:53299800-53314000 ZNF genes & repeats Primary hematopoietic stem cells blood
12 chr19:53301000-53314000 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr19:53301400-53309200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
14 chr19:53301400-53309600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr19:53301400-53309600 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
16 chr19:53301400-53310200 ZNF genes & repeats Adipose Nuclei Adipose
17 chr19:53301400-53312000 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr19:53301400-53314000 ZNF genes & repeats Duodenum Mucosa Duodenum
19 chr19:53302000-53314000 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
20 chr19:53302200-53310000 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
21 chr19:53302200-53311400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr19:53302200-53311400 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
23 chr19:53302800-53314000 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
24 chr19:53302800-53314000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr19:53303000-53311200 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
26 chr19:53303000-53311400 ZNF genes & repeats Primary B cells from peripheral blood blood
27 chr19:53303000-53312000 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
28 chr19:53303000-53314000 ZNF genes & repeats Primary B cells from cord blood blood
29 chr19:53303200-53309600 ZNF genes & repeats Thymus Thymus
30 chr19:53303200-53310000 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
31 chr19:53303200-53310000 ZNF genes & repeats Fetal Intestine Large intestine
32 chr19:53303200-53311400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr19:53303200-53314000 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr19:53303200-53314000 ZNF genes & repeats Lung lung
35 chr19:53303400-53309600 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr19:53303400-53309800 ZNF genes & repeats Gastric stomach
37 chr19:53303400-53311200 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
38 chr19:53303400-53312000 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
39 chr19:53303400-53314000 Strong transcription Placenta Amnion Placenta Amnion
40 chr19:53303600-53309600 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
41 chr19:53303600-53311400 ZNF genes & repeats Spleen Spleen
42 chr19:53303600-53314000 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
43 chr19:53303800-53310000 ZNF genes & repeats GM12878-XiMat blood
44 chr19:53303800-53311200 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
45 chr19:53304200-53311400 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
46 chr19:53304200-53314000 ZNF genes & repeats Aorta Aorta
47 chr19:53304400-53315600 Weak transcription Fetal Heart heart
48 chr19:53305000-53309800 Strong transcription iPS-15b Cell Line embryonic stem cell
49 chr19:53305200-53314000 ZNF genes & repeats Primary monocytes fromperipheralblood blood
50 chr19:53305400-53311200 ZNF genes & repeats Fetal Thymus thymus

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