Variant report

Variant	rs72609881
Chromosome Location	chr8:130529159-130529160
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10505544	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11774794	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12542618	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12679579	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12679981	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1821339	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2012880	0.97[ASN][1000 genomes]
rs4733710	0.97[ASN][1000 genomes]
rs58384810	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72609882	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72609883	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72609884	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72609886	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130526200-130529200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr8:130526800-130531800	Strong transcription	K562	blood
3	chr8:130527400-130529200	Enhancers	H1 Cell Line	embryonic stem cell
4	chr8:130527400-130530600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr8:130528000-130529400	Enhancers	HUES64 Cell Line	embryonic stem cell
6	chr8:130528200-130529200	Weak transcription	Dnd41	blood
7	chr8:130528200-130529400	Enhancers	H9 Cell Line	embryonic stem cell
8	chr8:130528400-130529600	Enhancers	HUES48 Cell Line	embryonic stem cell
9	chr8:130528400-130530000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
10	chr8:130528600-130529600	Enhancers	Fetal Heart	heart
11	chr8:130528600-130530000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr8:130528800-130530000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
13	chr8:130528800-130532600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
14	chr8:130529000-130529200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr8:130529000-130529200	Weak transcription	HUES6 Cell Line	embryonic stem cell
16	chr8:130529000-130531000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
17	chr8:130529000-130532800	Weak transcription	iPS-20b Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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