Variant report

Variant	rs72609884
Chromosome Location	chr8:130558289-130558290
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10505544	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11774794	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12542618	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12679579	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12679981	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1821339	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2012880	0.99[ASN][1000 genomes]
rs4733710	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs58384810	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72609881	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72609882	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72609883	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72609886	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130554200-130558800	Genic enhancers	Dnd41	blood
2	chr8:130555200-130560600	Enhancers	Primary hematopoietic stem cells short term culture	blood
3	chr8:130555400-130561600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr8:130556800-130558400	Enhancers	Monocytes-CD14+_RO01746	blood
5	chr8:130556800-130568000	Enhancers	Primary monocytes fromperipheralblood	blood
6	chr8:130557800-130561200	Enhancers	Thymus	Thymus
7	chr8:130557800-130561200	Flanking Active TSS	GM12878-XiMat	blood
8	chr8:130557800-130568600	Genic enhancers	K562	blood
9	chr8:130558000-130562600	Enhancers	Primary hematopoietic stem cells	blood
10	chr8:130558200-130559000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr8:130558200-130559400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr8:130558200-130561000	Enhancers	Fetal Thymus	thymus
13	chr8:130558200-130563000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr8:130558200-130564200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
15	chr8:130558200-130564600	Enhancers	Primary B cells from peripheral blood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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