Variant report

Variant	rs72609882
Chromosome Location	chr8:130529437-130529438
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10505544	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11774794	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12542618	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12679579	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12679981	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1821339	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2012880	0.97[ASN][1000 genomes]
rs4733710	0.97[ASN][1000 genomes]
rs58384810	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72609881	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72609883	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72609884	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72609886	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130526800-130531800	Strong transcription	K562	blood
2	chr8:130527400-130530600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr8:130528400-130529600	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr8:130528400-130530000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr8:130528600-130529600	Enhancers	Fetal Heart	heart
6	chr8:130528600-130530000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr8:130528800-130530000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr8:130528800-130532600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
9	chr8:130529000-130531000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
10	chr8:130529000-130532800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
11	chr8:130529200-130529600	ZNF genes & repeats	Dnd41	blood
12	chr8:130529200-130530800	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
13	chr8:130529200-130538400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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