Variant report

Variant	rs72675574
Chromosome Location	chr1:56639461-56639462
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10158913	0.81[AMR][1000 genomes]
rs11206749	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11206750	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11206753	0.83[AMR][1000 genomes]
rs1331862	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1360504	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2792794	0.84[EUR][1000 genomes]
rs2792795	0.85[EUR][1000 genomes]
rs2793660	0.85[EUR][1000 genomes]
rs2793661	0.85[EUR][1000 genomes]
rs2793664	0.85[EUR][1000 genomes]
rs4927306	0.82[EUR][1000 genomes]
rs706402	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56636400-56640000	Weak transcription	NHLF	lung
2	chr1:56636600-56639800	Weak transcription	Osteobl	bone
3	chr1:56637000-56640000	Weak transcription	NHDF-Ad	bronchial
4	chr1:56637000-56646200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr1:56637200-56639800	Weak transcription	Fetal Heart	heart
6	chr1:56639200-56641200	Enhancers	Muscle Satellite Cultured Cells	--
7	chr1:56639400-56640000	Weak transcription	Small Intestine	intestine

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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