Variant report

Variant	rs10158913
Chromosome Location	chr1:56651405-56651406
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10789017	0.81[AMR][1000 genomes]
rs11206749	0.81[AMR][1000 genomes]
rs11206750	0.81[AMR][1000 genomes]
rs11206753	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12117195	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12120924	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12128949	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1331862	0.81[AMR][1000 genomes]
rs1360504	0.81[AMR][1000 genomes]
rs2096086	0.81[AMR][1000 genomes]
rs2777758	0.84[EUR][1000 genomes]
rs2792774	0.86[EUR][1000 genomes]
rs2792775	0.86[EUR][1000 genomes]
rs2792776	0.86[EUR][1000 genomes]
rs2793663	0.81[EUR][1000 genomes]
rs2793665	0.81[EUR][1000 genomes]
rs2793666	0.81[EUR][1000 genomes]
rs2793691	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs61773389	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6663502	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6688582	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs706362	0.87[EUR][1000 genomes]
rs706371	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs706384	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs706388	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72675574	0.81[AMR][1000 genomes]
rs7552430	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7553732	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs778395	0.86[EUR][1000 genomes]
rs778429	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs778432	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs809018	0.87[EUR][1000 genomes]
rs9787032	0.81[AMR][1000 genomes]

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56645600-56654000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr1:56646800-56653800	Weak transcription	Fetal Muscle Leg	muscle
3	chr1:56647000-56655800	Weak transcription	Aorta	Aorta
4	chr1:56647200-56655000	Weak transcription	Fetal Kidney	kidney
5	chr1:56647600-56653000	Weak transcription	Fetal Lung	lung
6	chr1:56647600-56653800	Weak transcription	NHDF-Ad	bronchial
7	chr1:56647800-56651800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr1:56647800-56654200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
9	chr1:56647800-56654200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
10	chr1:56647800-56654600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
11	chr1:56649800-56653800	Weak transcription	HepG2	liver
12	chr1:56651200-56651600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr1:56651200-56651600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr1:56651200-56651800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
15	chr1:56651200-56652200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr1:56651200-56652200	Enhancers	HUES64 Cell Line	embryonic stem cell
17	chr1:56651200-56652200	Enhancers	iPS-18 Cell Line	embryonic stem cell
18	chr1:56651200-56652200	Enhancers	Fetal Stomach	stomach
19	chr1:56651200-56652400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr1:56651400-56651600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr1:56651400-56651800	Enhancers	HUES6 Cell Line	embryonic stem cell
22	chr1:56651400-56652000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
23	chr1:56651400-56652200	Enhancers	HUES48 Cell Line	embryonic stem cell

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