Variant report

Variant	rs12117195
Chromosome Location	chr1:56629179-56629180
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs10158913	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10489773	0.83[EUR][1000 genomes]
rs11206753	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12080296	0.83[EUR][1000 genomes]
rs12120924	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12123596	0.82[EUR][1000 genomes]
rs12128949	0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12132426	0.83[EUR][1000 genomes]
rs12140284	0.84[EUR][1000 genomes]
rs12141880	0.83[EUR][1000 genomes]
rs12408150	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs12408597	1.00[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs12410703	0.84[EUR][1000 genomes]
rs1360504	0.82[EUR][1000 genomes]
rs2777758	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2792774	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2792775	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2792776	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2793663	0.88[AMR][1000 genomes]
rs2793665	0.88[AMR][1000 genomes]
rs2793666	0.88[AMR][1000 genomes]
rs2793691	0.94[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs61773369	1.00[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs61773389	0.94[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6663502	0.94[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6682819	0.83[EUR][1000 genomes]
rs6688582	0.94[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6695004	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs706362	0.83[EUR][1000 genomes]
rs706371	0.85[EUR][1000 genomes]
rs706384	0.90[EUR][1000 genomes]
rs706388	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7543532	0.81[EUR][1000 genomes]
rs7544293	0.83[EUR][1000 genomes]
rs7552430	0.94[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7553732	0.94[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs778395	0.82[EUR][1000 genomes]
rs778429	0.90[EUR][1000 genomes]
rs778432	0.90[EUR][1000 genomes]
rs809018	0.83[EUR][1000 genomes]
rs9436537	0.88[AMR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56625000-56633000	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr1:56625400-56633000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr1:56625600-56636200	Weak transcription	Aorta	Aorta

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