Variant report

Variant	rs2792776
Chromosome Location	chr1:56702478-56702479
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs10158913	0.86[EUR][1000 genomes]
rs10789017	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11206753	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12117195	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12120924	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12128949	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2096086	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2777758	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2792774	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2792775	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2792783	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2792794	0.85[AMR][1000 genomes]
rs2792795	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2793660	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2793661	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2793663	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2793664	0.85[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2793665	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2793666	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2793672	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2793675	0.84[AMR][1000 genomes]
rs2793681	0.84[AMR][1000 genomes]
rs2793683	0.84[AMR][1000 genomes]
rs2793684	0.84[AMR][1000 genomes]
rs2793690	0.82[AMR][1000 genomes]
rs2793691	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4550099	0.81[EUR][1000 genomes]
rs61773389	0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6663502	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6688582	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs706362	0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs706371	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs706384	0.84[EUR][1000 genomes]
rs706388	0.84[EUR][1000 genomes]
rs7552430	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7553732	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs778395	0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs778429	0.84[EUR][1000 genomes]
rs778432	0.84[EUR][1000 genomes]
rs809018	0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9436537	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs947252	0.82[AMR][1000 genomes]
rs9787032	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56695200-56721200	Weak transcription	Psoas Muscle	Psoas
2	chr1:56701200-56702800	Enhancers	HepG2	liver
3	chr1:56702200-56721400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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