Variant report

Variant rs706388
Chromosome Location chr1:56655871-56655872
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:56652200-56656000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr1:56653000-56657400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr1:56653000-56658200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr1:56653600-56658000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr1:56653800-56656200 Enhancers Fetal Stomach stomach
6 chr1:56653800-56657000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
7 chr1:56653800-56657000 Enhancers Adipose Nuclei Adipose
8 chr1:56653800-56657000 Enhancers Skeletal Muscle Male skeletal muscle
9 chr1:56653800-56658000 Enhancers Fetal Muscle Leg muscle
10 chr1:56653800-56658200 Enhancers NHDF-Ad bronchial
11 chr1:56653800-56658400 Enhancers Psoas Muscle Psoas
12 chr1:56653800-56669400 Enhancers Placenta Placenta
13 chr1:56654000-56656000 Enhancers Fetal Lung lung
14 chr1:56654000-56656200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:56654000-56657200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr1:56654000-56657800 Enhancers Skeletal Muscle Female skeletal muscle
17 chr1:56654200-56656200 Enhancers iPS-20b Cell Line embryonic stem cell
18 chr1:56654200-56656200 Enhancers Brain Substantia Nigra brain
19 chr1:56654200-56657000 Enhancers iPS-15b Cell Line embryonic stem cell
20 chr1:56654400-56656200 Enhancers HUES6 Cell Line embryonic stem cell
21 chr1:56654400-56657400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr1:56654400-56657600 Enhancers HUES64 Cell Line embryonic stem cell
23 chr1:56654600-56656000 Enhancers HUES48 Cell Line embryonic stem cell
24 chr1:56654600-56656200 Enhancers H9 Cell Line embryonic stem cell
25 chr1:56654600-56656200 Enhancers Brain Inferior Temporal Lobe brain
26 chr1:56654600-56656600 Enhancers iPS-18 Cell Line embryonic stem cell
27 chr1:56654600-56657000 Enhancers ES-I3 Cell Line embryonic stem cell
28 chr1:56654800-56656200 Enhancers ES-WA7 Cell Line embryonic stem cell
29 chr1:56654800-56656800 Enhancers A549 lung
30 chr1:56655000-56656000 Enhancers Stomach Smooth Muscle stomach
31 chr1:56655000-56656800 Enhancers H1 Cell Line embryonic stem cell
32 chr1:56655000-56657600 Flanking Active TSS HepG2 liver
33 chr1:56655000-56658400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
34 chr1:56655200-56663800 Weak transcription Right Ventricle heart
35 chr1:56655400-56656200 Enhancers Sigmoid Colon Sigmoid Colon
36 chr1:56655400-56656600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr1:56655600-56656800 Enhancers HSMMtube muscle
38 chr1:56655600-56657400 Weak transcription Ovary ovary
39 chr1:56655800-56656000 Enhancers Aorta Aorta
40 chr1:56655800-56656000 Enhancers Brain Hippocampus Middle brain
41 chr1:56655800-56656200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
42 chr1:56655800-56656200 Bivalent Enhancer Duodenum Mucosa Duodenum
43 chr1:56655800-56656200 Enhancers Left Ventricle heart
44 chr1:56655800-56656200 Enhancers Right Atrium heart
45 chr1:56655800-56656400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr1:56655800-56658200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin

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