Variant report

Variant	rs12410703
Chromosome Location	chr1:56618138-56618139
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10489773	0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11206733	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12072872	0.80[ASN][1000 genomes]
rs12072883	0.80[ASN][1000 genomes]
rs12077930	0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12080296	0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12117195	0.84[EUR][1000 genomes]
rs12117303	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12123596	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12132426	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12140284	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12141880	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12408150	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12408597	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1591010	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4927300	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4927301	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4927305	0.81[EUR][1000 genomes]
rs4927306	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs59536199	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs61772132	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs61772134	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs61772138	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs61773369	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6588607	0.81[EUR][1000 genomes]
rs6682819	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6695004	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7512228	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7526008	0.80[ASN][1000 genomes]
rs7543532	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7544293	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56605800-56622600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr1:56612800-56618600	Weak transcription	Fetal Thymus	thymus
3	chr1:56615200-56618600	Weak transcription	HUVEC	blood vessel
4	chr1:56616000-56618800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr1:56617000-56619000	Weak transcription	Fetal Muscle Leg	muscle
6	chr1:56617400-56618400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
7	chr1:56617400-56618400	Weak transcription	Fetal Intestine Small	intestine
8	chr1:56617400-56618600	Weak transcription	NHDF-Ad	bronchial
9	chr1:56618000-56618400	Weak transcription	Fetal Intestine Large	intestine
10	chr1:56618000-56618800	Enhancers	Psoas Muscle	Psoas
11	chr1:56618000-56619400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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