The 2.0 version of rSNPBase

Variant report

Variant rs61772134
Chromosome Location chr1:56538521-56538522
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:28 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:56518200-56540000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:56529200-56540400 Enhancers NHDF-Ad bronchial
3 chr1:56533000-56540600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr1:56535200-56538600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr1:56535200-56538600 Weak transcription Left Ventricle heart
6 chr1:56535200-56538600 Weak transcription Psoas Muscle Psoas
7 chr1:56535200-56539000 Weak transcription HSMMtube muscle
8 chr1:56535200-56539400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr1:56535600-56539800 Weak transcription HSMM muscle
10 chr1:56535800-56539000 Weak transcription Fetal Stomach stomach
11 chr1:56536200-56539400 Weak transcription Right Atrium heart
12 chr1:56536800-56538800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr1:56536800-56538800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr1:56536800-56539000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr1:56537200-56539800 Weak transcription Pancreas Pancrea
16 chr1:56537400-56539000 Weak transcription NHLF lung
17 chr1:56537400-56540400 Enhancers HUVEC blood vessel
18 chr1:56537800-56540400 Enhancers Aorta Aorta
19 chr1:56537800-56540400 Enhancers Fetal Muscle Leg muscle
20 chr1:56537800-56540600 Enhancers Skeletal Muscle Male skeletal muscle
21 chr1:56538000-56539800 Enhancers Skeletal Muscle Female skeletal muscle
22 chr1:56538200-56540200 Enhancers Stomach Smooth Muscle stomach
23 chr1:56538200-56540400 Enhancers Muscle Satellite Cultured Cells --
24 chr1:56538200-56543000 Enhancers Placenta Placenta
25 chr1:56538400-56538800 Weak transcription Hela-S3 cervix
26 chr1:56538400-56538800 Weak transcription Osteobl bone
27 chr1:56538400-56540400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr1:56538400-56540400 Enhancers Ovary ovary

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Last update: Aug 31, 2015