Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10489773	0.84[EUR][1000 genomes]
rs10888957	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11206749	0.80[EUR][1000 genomes]
rs12080296	0.84[EUR][1000 genomes]
rs12117303	0.81[EUR][1000 genomes]
rs12123596	0.81[EUR][1000 genomes]
rs12132426	0.82[EUR][1000 genomes]
rs12140284	0.81[EUR][1000 genomes]
rs12141880	0.82[EUR][1000 genomes]
rs1229947	0.80[EUR][1000 genomes]
rs12408150	0.84[EUR][1000 genomes]
rs12408597	0.81[EUR][1000 genomes]
rs12410703	0.81[EUR][1000 genomes]
rs1360504	0.83[EUR][1000 genomes]
rs4927306	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs59536199	0.81[EUR][1000 genomes]
rs61772132	0.81[EUR][1000 genomes]
rs61772134	0.81[EUR][1000 genomes]
rs61772138	0.81[EUR][1000 genomes]
rs61773369	0.81[EUR][1000 genomes]
rs6588607	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6588608	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6657024	0.99[AFR][1000 genomes];0.94[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6680237	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6682819	0.84[EUR][1000 genomes]
rs6695004	0.84[EUR][1000 genomes]
rs6697082	0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7512228	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7514852	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7543532	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7544293	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs4927305	HSPB11	cis	parietal	SCAN
rs4927305	GPX7	cis	parietal	SCAN

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56597200-56601400	Enhancers	Primary T cells from cord blood	blood
2	chr1:56597600-56599000	Weak transcription	Spleen	Spleen
3	chr1:56597800-56599200	Active TSS	GM12878-XiMat	blood
4	chr1:56597800-56600200	Enhancers	Hela-S3	cervix
5	chr1:56598000-56598800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr1:56598200-56598800	Enhancers	Right Ventricle	heart
7	chr1:56598200-56601600	Enhancers	Primary B cells from peripheral blood	blood
8	chr1:56598200-56601800	Enhancers	Fetal Thymus	thymus
9	chr1:56598400-56598800	Enhancers	Right Atrium	heart
10	chr1:56598400-56599400	Weak transcription	Left Ventricle	heart
11	chr1:56598400-56602800	Weak transcription	Psoas Muscle	Psoas
12	chr1:56598600-56603800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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