Variant report

Variant	rs12123596
Chromosome Location	chr1:56575319-56575320
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 44 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:44)

rs_ID	r²[population]
rs10489773	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10888957	0.92[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs11206699	0.80[ASN][1000 genomes]
rs11206704	0.80[ASN][1000 genomes]
rs11206709	0.80[ASN][1000 genomes]
rs11206710	0.80[ASN][1000 genomes]
rs11206711	0.80[ASN][1000 genomes]
rs11206733	0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12072872	0.91[ASN][1000 genomes]
rs12072883	0.91[ASN][1000 genomes]
rs12074486	0.80[ASN][1000 genomes]
rs12075636	0.80[ASN][1000 genomes]
rs12077930	0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12080296	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12117195	0.82[EUR][1000 genomes]
rs12117303	0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12132426	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12140284	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12141880	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12408150	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12408597	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12410703	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1591010	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4927300	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4927301	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4927305	0.81[EUR][1000 genomes]
rs59536199	0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs59749317	0.80[ASN][1000 genomes]
rs61210945	0.80[ASN][1000 genomes]
rs61772132	0.97[EUR][1000 genomes]
rs61772134	0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs61772138	0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs61773369	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6588607	0.81[EUR][1000 genomes]
rs6588608	0.92[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6668403	0.80[ASN][1000 genomes]
rs6682819	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6695004	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7512228	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7514852	0.92[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7515479	0.80[ASN][1000 genomes]
rs7526008	0.91[ASN][1000 genomes]
rs7543532	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7544293	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56574200-56576600	Weak transcription	Fetal Heart	heart
2	chr1:56574600-56576600	Weak transcription	Dnd41	blood
3	chr1:56575200-56578200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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