Variant report

Variant	rs1360504
Chromosome Location	chr1:56627905-56627906
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10158913	0.81[AMR][1000 genomes]
rs11206749	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11206750	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11206753	0.83[AMR][1000 genomes]
rs12117195	0.82[EUR][1000 genomes]
rs1331862	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2792794	0.82[EUR][1000 genomes]
rs2792795	0.83[EUR][1000 genomes]
rs2793660	0.83[EUR][1000 genomes]
rs2793661	0.83[EUR][1000 genomes]
rs2793664	0.83[EUR][1000 genomes]
rs4927305	0.83[EUR][1000 genomes]
rs4927306	0.85[EUR][1000 genomes]
rs6588607	0.83[EUR][1000 genomes]
rs706402	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72675574	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56625000-56633000	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr1:56625200-56628000	Weak transcription	Right Atrium	heart
3	chr1:56625400-56633000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr1:56625600-56636200	Weak transcription	Aorta	Aorta
5	chr1:56627600-56628200	Enhancers	Fetal Heart	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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