Variant report

Variant	rs72726600
Chromosome Location	chr8:129872714-129872715
allele	A/C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:129872569..129876540-chr8:129878616..129881184,3	K562	blood:
2	chr8:128813410..128816212-chr8:129870107..129873143,3	MCF-7	breast:

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs11780321	0.89[EUR][1000 genomes]
rs11781488	1.00[EUR][1000 genomes]
rs11989880	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16903635	0.98[EUR][1000 genomes]
rs17818346	0.91[EUR][1000 genomes]
rs1879163	0.97[EUR][1000 genomes]
rs1879164	0.97[EUR][1000 genomes]
rs4645529	0.99[EUR][1000 genomes]
rs55788778	0.89[EUR][1000 genomes]
rs58858133	0.97[EUR][1000 genomes]
rs6996393	0.97[EUR][1000 genomes]
rs72726589	0.99[EUR][1000 genomes]
rs7828412	0.89[EUR][1000 genomes]
rs9643240	0.94[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv517445	chr8:129859924-129881299	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:129864200-129873200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr8:129864200-129873200	Weak transcription	NH-A	brain
3	chr8:129864400-129873400	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr8:129866600-129873200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr8:129867200-129873200	Weak transcription	Osteobl	bone
6	chr8:129868000-129873000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
7	chr8:129869200-129873000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr8:129871400-129872800	ZNF genes & repeats	Dnd41	blood
9	chr8:129871600-129873600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr8:129871600-129875400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
11	chr8:129871800-129873600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr8:129872000-129877000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
13	chr8:129872400-129873200	Enhancers	HUES64 Cell Line	embryonic stem cell
14	chr8:129872600-129872800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr8:129872600-129872800	Flanking Active TSS	NHDF-Ad	bronchial
16	chr8:129872600-129873200	Enhancers	NHEK	skin
17	chr8:129872600-129873400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr8:129872600-129873400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr8:129872600-129873600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
20	chr8:129872600-129875800	Enhancers	ES-I3 Cell Line	embryonic stem cell
21	chr8:129872600-129875800	Enhancers	iPS-18 Cell Line	embryonic stem cell
22	chr8:129872600-129877200	Enhancers	Cortex derived primary cultured neurospheres	brain

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