The 2.0 version of rSNPBase

Variant report

Variant rs72781800
Chromosome Location chr2:7161076-7161077
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:7131000-7167600 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr2:7131400-7162400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr2:7142600-7163000 Weak transcription Small Intestine intestine
4 chr2:7148200-7172600 Weak transcription H9 Cell Line embryonic stem cell
5 chr2:7148800-7171400 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr2:7149200-7163800 Weak transcription Gastric stomach
7 chr2:7150600-7162400 Weak transcription Duodenum Mucosa Duodenum
8 chr2:7151000-7164600 Weak transcription HUES64 Cell Line embryonic stem cell
9 chr2:7151200-7185200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr2:7152600-7192400 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr2:7153000-7162200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr2:7154000-7183200 Strong transcription Primary T cells from cord blood blood
13 chr2:7154000-7190200 Strong transcription Dnd41 blood
14 chr2:7154600-7163200 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr2:7154600-7174800 Weak transcription Primary B cells from cord blood blood
16 chr2:7154600-7184200 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr2:7154800-7161400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr2:7154800-7164800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr2:7155000-7164600 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr2:7155000-7171400 Strong transcription Primary T helper cells fromperipheralblood blood
21 chr2:7155200-7161600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
22 chr2:7155200-7182000 Strong transcription Primary T helper naive cells fromperipheralblood blood
23 chr2:7155400-7162000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
24 chr2:7155400-7162600 Weak transcription K562 blood
25 chr2:7155400-7162600 Weak transcription NH-A brain
26 chr2:7155600-7162800 Weak transcription NHDF-Ad bronchial
27 chr2:7155600-7163200 Weak transcription Fetal Intestine Large intestine
28 chr2:7155600-7178800 Strong transcription Primary T helper cells PMA-I stimulated --
29 chr2:7155800-7164400 Weak transcription Primary monocytes fromperipheralblood blood
30 chr2:7156000-7161800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr2:7156000-7168800 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr2:7157000-7162000 Genic enhancers Pancreas Pancrea
33 chr2:7157000-7177600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
34 chr2:7157000-7179200 Weak transcription Aorta Aorta
35 chr2:7157200-7164400 Weak transcription Colonic Mucosa Colon
36 chr2:7157200-7169000 Strong transcription Primary neutrophils fromperipheralblood blood
37 chr2:7157200-7185200 Strong transcription Primary hematopoietic stem cells short term culture blood
38 chr2:7157400-7166000 Weak transcription Rectal Smooth Muscle rectum
39 chr2:7157600-7165400 Strong transcription Primary hematopoietic stem cells blood
40 chr2:7157800-7162400 Genic enhancers Fetal Muscle Trunk muscle
41 chr2:7158000-7166000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr2:7158000-7168400 Strong transcription Primary T cells fromperipheralblood blood
43 chr2:7158200-7162200 Strong transcription Fetal Intestine Small intestine
44 chr2:7158200-7166000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr2:7158200-7173200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr2:7158200-7188800 Weak transcription iPS-18 Cell Line embryonic stem cell
47 chr2:7158400-7164600 Weak transcription iPS-20b Cell Line embryonic stem cell
48 chr2:7158400-7173000 Weak transcription iPS-15b Cell Line embryonic stem cell
49 chr2:7158400-7186800 Weak transcription Placenta Amnion Placenta Amnion
50 chr2:7158600-7161200 Weak transcription HepG2 liver

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Last update: Aug 31, 2015