The 2.0 version of rSNPBase

Variant report

Variant rs56329647
Chromosome Location chr2:7184590-7184591
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:7151200-7185200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr2:7152600-7192400 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr2:7154000-7190200 Strong transcription Dnd41 blood
4 chr2:7157200-7185200 Strong transcription Primary hematopoietic stem cells short term culture blood
5 chr2:7158200-7188800 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr2:7158400-7186800 Weak transcription Placenta Amnion Placenta Amnion
7 chr2:7159400-7186800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr2:7164800-7189000 Weak transcription H1 Cell Line embryonic stem cell
9 chr2:7167400-7200400 Weak transcription Rectal Smooth Muscle rectum
10 chr2:7168000-7185400 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr2:7170800-7187600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr2:7172000-7191200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr2:7172200-7186400 Weak transcription Primary monocytes fromperipheralblood blood
14 chr2:7172200-7197200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr2:7173600-7189200 Weak transcription HUES6 Cell Line embryonic stem cell
16 chr2:7173800-7188600 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr2:7174200-7184600 Weak transcription Duodenum Mucosa Duodenum
18 chr2:7174800-7195200 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr2:7175400-7187600 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr2:7175800-7187400 Weak transcription Fetal Intestine Small intestine
21 chr2:7178400-7197600 Weak transcription Fetal Heart heart
22 chr2:7180200-7185200 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr2:7180200-7188800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr2:7180400-7185200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr2:7180600-7186400 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr2:7181000-7184600 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr2:7181000-7185400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr2:7181000-7185800 Weak transcription Fetal Thymus thymus
29 chr2:7181000-7186600 Weak transcription HUES64 Cell Line embryonic stem cell
30 chr2:7181000-7188600 Weak transcription Stomach Smooth Muscle stomach
31 chr2:7181200-7185600 Weak transcription Placenta Placenta
32 chr2:7181600-7188200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr2:7181800-7185200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr2:7181800-7190400 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr2:7182000-7184600 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr2:7182000-7189800 Weak transcription Brain Germinal Matrix brain
37 chr2:7182000-7191200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr2:7182000-7194000 Weak transcription Ovary ovary
39 chr2:7182000-7196000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr2:7182000-7198000 Weak transcription Right Ventricle heart
41 chr2:7182200-7184600 Weak transcription Primary T cells fromperipheralblood blood
42 chr2:7182200-7184800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
43 chr2:7182200-7194600 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr2:7182400-7184600 Weak transcription Brain Inferior Temporal Lobe brain
45 chr2:7182400-7194000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr2:7182600-7185000 Weak transcription Primary T helper cells fromperipheralblood blood
47 chr2:7182600-7195000 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr2:7182800-7184600 Weak transcription Fetal Brain Female brain
49 chr2:7182800-7184800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr2:7182800-7184800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015