The 2.0 version of rSNPBase

Variant report

Variant rs1050563
Chromosome Location chr2:7183977-7183978
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:7151200-7185200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr2:7152600-7192400 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr2:7154000-7190200 Strong transcription Dnd41 blood
4 chr2:7154600-7184200 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr2:7157200-7185200 Strong transcription Primary hematopoietic stem cells short term culture blood
6 chr2:7158200-7188800 Weak transcription iPS-18 Cell Line embryonic stem cell
7 chr2:7158400-7186800 Weak transcription Placenta Amnion Placenta Amnion
8 chr2:7159400-7186800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr2:7164800-7189000 Weak transcription H1 Cell Line embryonic stem cell
10 chr2:7167400-7200400 Weak transcription Rectal Smooth Muscle rectum
11 chr2:7168000-7185400 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr2:7169600-7184200 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr2:7170800-7187600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr2:7172000-7191200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr2:7172200-7184200 Weak transcription Gastric stomach
16 chr2:7172200-7186400 Weak transcription Primary monocytes fromperipheralblood blood
17 chr2:7172200-7197200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr2:7172400-7184400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr2:7173600-7184200 Weak transcription Thymus Thymus
20 chr2:7173600-7189200 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr2:7173800-7188600 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr2:7174200-7184600 Weak transcription Duodenum Mucosa Duodenum
23 chr2:7174800-7195200 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr2:7175400-7187600 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr2:7175800-7187400 Weak transcription Fetal Intestine Small intestine
26 chr2:7177800-7184000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr2:7178400-7197600 Weak transcription Fetal Heart heart
28 chr2:7180200-7185200 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr2:7180200-7188800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
30 chr2:7180400-7184000 Weak transcription Colon Smooth Muscle Colon
31 chr2:7180400-7184400 Weak transcription Fetal Kidney kidney
32 chr2:7180400-7185200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr2:7180600-7186400 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr2:7181000-7184600 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr2:7181000-7185400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr2:7181000-7185800 Weak transcription Fetal Thymus thymus
37 chr2:7181000-7186600 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr2:7181000-7188600 Weak transcription Stomach Smooth Muscle stomach
39 chr2:7181200-7185600 Weak transcription Placenta Placenta
40 chr2:7181600-7188200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr2:7181800-7185200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr2:7181800-7190400 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr2:7182000-7184600 Weak transcription Primary T helper naive cells fromperipheralblood blood
44 chr2:7182000-7189800 Weak transcription Brain Germinal Matrix brain
45 chr2:7182000-7191200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr2:7182000-7194000 Weak transcription Ovary ovary
47 chr2:7182000-7196000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr2:7182000-7198000 Weak transcription Right Ventricle heart
49 chr2:7182200-7184400 Weak transcription Brain Hippocampus Middle brain
50 chr2:7182200-7184600 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015