Variant report

Variant	rs72810741
Chromosome Location	chr10:22341656-22341657
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:22331842..22334203-chr10:22341389..22343580,2	K562	blood:
2	chr10:22338378..22342147-chr10:22342540..22344331,3	K562	blood:

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs16921947	0.89[EUR][1000 genomes]
rs55702118	1.00[EUR][1000 genomes]
rs55789720	1.00[EUR][1000 genomes]
rs55880968	0.95[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs56024469	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56027722	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs56121502	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56162327	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs56323200	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs61454417	0.89[EUR][1000 genomes]
rs66867344	0.89[EUR][1000 genomes]
rs66954116	1.00[EUR][1000 genomes]
rs67106981	1.00[EUR][1000 genomes]
rs72797462	0.89[EUR][1000 genomes]
rs72797470	0.89[EUR][1000 genomes]
rs72797476	0.89[EUR][1000 genomes]
rs72797490	1.00[EUR][1000 genomes]
rs72802964	1.00[EUR][1000 genomes]
rs72804392	0.87[EUR][1000 genomes]
rs72806318	0.87[EUR][1000 genomes]
rs72806334	0.89[EUR][1000 genomes]
rs72806949	0.89[EUR][1000 genomes]
rs72806987	0.92[AFR][1000 genomes]
rs72806995	0.89[EUR][1000 genomes]
rs72806996	0.89[EUR][1000 genomes]
rs72807000	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72807001	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72810732	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72810756	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72810759	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72810761	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72810769	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72810771	0.87[EUR][1000 genomes]
rs72810772	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs72810773	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs72812739	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831808	chr10:22187850-22357814	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22341600-22342200	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr10:22341600-22342600	Enhancers	HepG2	liver

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