Variant report

Variant	rs72810732
Chromosome Location	chr10:22330465-22330466
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:22290153..22294328-chr10:22329195..22335039,7	K562	blood:

Variant related genes	Relation type
ENSG00000136770	Chromatin interaction

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs16921947	0.89[EUR][1000 genomes]
rs55702118	1.00[EUR][1000 genomes]
rs55789720	1.00[EUR][1000 genomes]
rs55880968	0.89[EUR][1000 genomes]
rs56024469	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56027722	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs56121502	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56162327	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs56323200	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs56328322	1.00[EUR][1000 genomes]
rs61454417	0.89[EUR][1000 genomes]
rs66867344	0.89[EUR][1000 genomes]
rs66954116	1.00[EUR][1000 genomes]
rs67106981	1.00[EUR][1000 genomes]
rs72797462	0.89[EUR][1000 genomes]
rs72797470	0.89[EUR][1000 genomes]
rs72797476	0.89[EUR][1000 genomes]
rs72797490	1.00[EUR][1000 genomes]
rs72802961	1.00[EUR][1000 genomes]
rs72802964	1.00[EUR][1000 genomes]
rs72804392	0.87[EUR][1000 genomes]
rs72806318	0.87[EUR][1000 genomes]
rs72806334	0.89[EUR][1000 genomes]
rs72806949	0.89[EUR][1000 genomes]
rs72806995	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72806996	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs72807000	0.89[EUR][1000 genomes]
rs72807001	0.89[EUR][1000 genomes]
rs72810741	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72810756	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72810759	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72810761	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72810769	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72810771	0.87[EUR][1000 genomes]
rs72810772	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs72810773	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs72812739	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs72812756	0.89[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831808	chr10:22187850-22357814	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22329200-22331400	Weak transcription	K562	blood
2	chr10:22329800-22332600	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr10:22330200-22331400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr10:22330400-22331400	Weak transcription	H1 Cell Line	embryonic stem cell
5	chr10:22330400-22331800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr10:22330400-22332200	Enhancers	iPS-15b Cell Line	embryonic stem cell

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