The 2.0 version of rSNPBase

Variant report

Variant rs72811939
Chromosome Location chr2:73764457-73764458
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:73731800-73807600 Weak transcription Hela-S3 cervix
2 chr2:73741000-73767400 Weak transcription Rectal Smooth Muscle rectum
3 chr2:73744200-73799800 Weak transcription NH-A brain
4 chr2:73746000-73765200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr2:73747800-73786800 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr2:73756000-73766800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr2:73756400-73765000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr2:73757000-73764600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr2:73757800-73764600 Strong transcription Primary T helper cells fromperipheralblood blood
10 chr2:73758000-73765000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr2:73758000-73799800 Weak transcription Brain Cingulate Gyrus brain
12 chr2:73758200-73765000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr2:73758200-73766000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr2:73758200-73785800 Weak transcription Brain Substantia Nigra brain
15 chr2:73758200-73800200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr2:73758400-73764800 Weak transcription Small Intestine intestine
17 chr2:73758400-73765000 Weak transcription Brain Hippocampus Middle brain
18 chr2:73758400-73786800 Weak transcription Brain Angular Gyrus brain
19 chr2:73759400-73765200 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr2:73759400-73774200 Weak transcription Placenta Amnion Placenta Amnion
21 chr2:73759600-73828000 Weak transcription Pancreas Pancrea
22 chr2:73759800-73764600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr2:73759800-73766200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr2:73760000-73764800 Strong transcription Primary T cells fromperipheralblood blood
25 chr2:73760000-73765600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr2:73760400-73764600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr2:73760400-73764800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr2:73760400-73764800 Weak transcription Fetal Stomach stomach
29 chr2:73760400-73764800 Weak transcription Lung lung
30 chr2:73760400-73765200 Weak transcription A549 lung
31 chr2:73760400-73765800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr2:73760400-73767800 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr2:73760400-73769200 Weak transcription Gastric stomach
34 chr2:73760600-73764600 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr2:73760600-73764800 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr2:73760600-73828000 Weak transcription Right Ventricle heart
37 chr2:73760800-73787000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr2:73761000-73767000 Weak transcription Psoas Muscle Psoas
39 chr2:73761600-73765000 Strong transcription Liver Liver
40 chr2:73761800-73765800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr2:73761800-73766400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr2:73762000-73765000 Strong transcription Fetal Intestine Large intestine
43 chr2:73762000-73765000 Strong transcription Rectal Mucosa Donor 31 rectum
44 chr2:73762000-73765400 Strong transcription Rectal Mucosa Donor 29 rectum
45 chr2:73762000-73766400 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
46 chr2:73762000-73786600 Weak transcription Muscle Satellite Cultured Cells --
47 chr2:73762400-73765200 Strong transcription Brain Anterior Caudate brain
48 chr2:73762600-73764600 Strong transcription Cortex derived primary cultured neurospheres brain
49 chr2:73762600-73765400 Strong transcription Primary T helper cells PMA-I stimulated --
50 chr2:73762600-73766400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015