The 2.0 version of rSNPBase

Variant report

Variant rs72842060
Chromosome Location chr2:86064849-86064850
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86039800-86074800 Weak transcription Aorta Aorta
2 chr2:86054800-86066600 Weak transcription Ovary ovary
3 chr2:86055000-86065400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr2:86055000-86065400 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr2:86055000-86065800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr2:86055000-86066000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr2:86055000-86066000 Weak transcription Primary T helper cells fromperipheralblood blood
8 chr2:86055000-86066400 Weak transcription Primary monocytes fromperipheralblood blood
9 chr2:86055000-86070800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr2:86055000-86071200 Weak transcription Psoas Muscle Psoas
11 chr2:86055000-86080000 Weak transcription Duodenum Mucosa Duodenum
12 chr2:86055200-86065000 Weak transcription Brain Angular Gyrus brain
13 chr2:86055200-86065200 Weak transcription Primary T cells from cord blood blood
14 chr2:86055200-86065200 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr2:86055200-86065200 Weak transcription Monocytes-CD14+_RO01746 blood
16 chr2:86055200-86065400 Weak transcription Brain Cingulate Gyrus brain
17 chr2:86055200-86065800 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr2:86055200-86065800 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr2:86055200-86065800 Weak transcription Brain Inferior Temporal Lobe brain
20 chr2:86055200-86066400 Weak transcription Brain Substantia Nigra brain
21 chr2:86055200-86066400 Weak transcription Stomach Smooth Muscle stomach
22 chr2:86055200-86069200 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr2:86055200-86070800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr2:86055200-86073200 Weak transcription NHDF-Ad bronchial
25 chr2:86055200-86078200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr2:86055200-86080400 Weak transcription Colonic Mucosa Colon
27 chr2:86055400-86065000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr2:86055400-86065200 Weak transcription Fetal Muscle Leg muscle
29 chr2:86055400-86065400 Weak transcription Primary B cells from peripheral blood blood
30 chr2:86055400-86065400 Weak transcription Thymus Thymus
31 chr2:86055400-86066000 Weak transcription Placenta Placenta
32 chr2:86055400-86066400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
33 chr2:86055400-86066600 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr2:86055400-86069400 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr2:86055400-86071200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr2:86055600-86065000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr2:86055600-86065000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr2:86055600-86065000 Weak transcription Brain Hippocampus Middle brain
39 chr2:86055600-86065400 Weak transcription Lung lung
40 chr2:86055600-86066800 Weak transcription NHEK skin
41 chr2:86055600-86071400 Weak transcription Pancreas Pancrea
42 chr2:86055800-86065400 Weak transcription Spleen Spleen
43 chr2:86056000-86065000 Weak transcription Fetal Muscle Trunk muscle
44 chr2:86056000-86065200 Weak transcription Brain Anterior Caudate brain
45 chr2:86057200-86071200 Weak transcription Primary hematopoietic stem cells blood
46 chr2:86057600-86065800 Weak transcription Liver Liver
47 chr2:86057600-86068400 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr2:86057800-86068800 Weak transcription Dnd41 blood
49 chr2:86058200-86065400 Weak transcription Fetal Thymus thymus
50 chr2:86058200-86066600 Weak transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015