The 2.0 version of rSNPBase

Variant report

Variant rs13016226
Chromosome Location chr2:86103740-86103741
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86066000-86106200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr2:86075400-86114000 Weak transcription Aorta Aorta
3 chr2:86079600-86106200 Weak transcription Brain Germinal Matrix brain
4 chr2:86081000-86112400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr2:86086800-86113000 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr2:86088400-86105400 Weak transcription Osteobl bone
7 chr2:86088600-86111600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr2:86089800-86106000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr2:86089800-86106000 Weak transcription Primary T regulatory cells fromperipheralblood blood
10 chr2:86090400-86104600 Weak transcription Liver Liver
11 chr2:86090600-86109000 Weak transcription Fetal Stomach stomach
12 chr2:86090600-86110600 Weak transcription Fetal Muscle Trunk muscle
13 chr2:86092200-86105200 Weak transcription Right Atrium heart
14 chr2:86093200-86106200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr2:86093400-86104600 Weak transcription Ovary ovary
16 chr2:86093400-86105800 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr2:86093400-86106200 Weak transcription Duodenum Mucosa Duodenum
18 chr2:86093400-86106800 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr2:86093400-86112400 Weak transcription Colonic Mucosa Colon
20 chr2:86093600-86111600 Weak transcription Colon Smooth Muscle Colon
21 chr2:86093800-86106000 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr2:86093800-86113000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr2:86094000-86105400 Weak transcription NH-A brain
24 chr2:86094800-86105400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr2:86094800-86106000 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr2:86095400-86104000 Weak transcription A549 lung
27 chr2:86096200-86108400 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
28 chr2:86096800-86107600 Enhancers Brain Hippocampus Middle brain
29 chr2:86097000-86104400 Weak transcription Pancreatic Islets Pancreatic Islet
30 chr2:86097600-86105800 Weak transcription Dnd41 blood
31 chr2:86097600-86106000 Weak transcription Psoas Muscle Psoas
32 chr2:86097600-86108600 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr2:86097600-86109200 Weak transcription NHEK skin
34 chr2:86099600-86104000 Enhancers Brain Anterior Caudate brain
35 chr2:86099600-86106000 Weak transcription Gastric stomach
36 chr2:86100200-86111800 Weak transcription K562 blood
37 chr2:86100400-86104600 Weak transcription Pancreas Pancrea
38 chr2:86100400-86106000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr2:86100400-86106000 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr2:86100400-86109000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr2:86101200-86111600 Weak transcription NHDF-Ad bronchial
42 chr2:86101400-86104000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr2:86101400-86108600 Enhancers Primary T killer naive cells fromperipheralblood blood
44 chr2:86102000-86103800 Weak transcription Primary T helper cells fromperipheralblood blood
45 chr2:86102000-86104000 Enhancers Primary B cells from peripheral blood blood
46 chr2:86102000-86106200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr2:86102200-86105000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
48 chr2:86102400-86104200 Genic enhancers Fetal Thymus thymus
49 chr2:86102600-86103800 Enhancers Primary hematopoietic stem cells blood
50 chr2:86102800-86104200 Enhancers Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015