The 2.0 version of rSNPBase

Variant report

Variant rs11127008
Chromosome Location chr2:86107840-86107841
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86075400-86114000 Weak transcription Aorta Aorta
2 chr2:86081000-86112400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr2:86086800-86113000 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr2:86088600-86111600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr2:86090600-86109000 Weak transcription Fetal Stomach stomach
6 chr2:86090600-86110600 Weak transcription Fetal Muscle Trunk muscle
7 chr2:86093400-86112400 Weak transcription Colonic Mucosa Colon
8 chr2:86093600-86111600 Weak transcription Colon Smooth Muscle Colon
9 chr2:86093800-86113000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr2:86096200-86108400 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
11 chr2:86097600-86108600 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr2:86097600-86109200 Weak transcription NHEK skin
13 chr2:86100200-86111800 Weak transcription K562 blood
14 chr2:86100400-86109000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr2:86101200-86111600 Weak transcription NHDF-Ad bronchial
16 chr2:86101400-86108600 Enhancers Primary T killer naive cells fromperipheralblood blood
17 chr2:86102800-86115200 Weak transcription Small Intestine intestine
18 chr2:86103200-86108200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr2:86103400-86108600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr2:86103600-86108200 Weak transcription Primary B cells from cord blood blood
21 chr2:86103600-86111800 Weak transcription Fetal Muscle Leg muscle
22 chr2:86104200-86112400 Weak transcription Monocytes-CD14+_RO01746 blood
23 chr2:86104400-86108000 Weak transcription Primary monocytes fromperipheralblood blood
24 chr2:86104600-86112000 Weak transcription Stomach Mucosa stomach
25 chr2:86104800-86113400 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr2:86105400-86112400 Weak transcription Ovary ovary
27 chr2:86105800-86108200 Enhancers Primary B cells from peripheral blood blood
28 chr2:86105800-86108200 Enhancers Primary Natural Killer cells fromperipheralblood blood
29 chr2:86106200-86112200 Weak transcription Muscle Satellite Cultured Cells --
30 chr2:86106200-86112200 Weak transcription Liver Liver
31 chr2:86106400-86108000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr2:86106400-86109000 Weak transcription Lung lung
33 chr2:86106400-86112200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr2:86106400-86112400 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr2:86106400-86112400 Weak transcription NH-A brain
36 chr2:86106400-86113800 Weak transcription Pancreas Pancrea
37 chr2:86106400-86113800 Weak transcription Right Atrium heart
38 chr2:86106400-86115200 Weak transcription Gastric stomach
39 chr2:86106600-86108800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr2:86106600-86109000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr2:86106600-86109000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr2:86106600-86111600 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr2:86106600-86111800 Weak transcription Duodenum Mucosa Duodenum
44 chr2:86106600-86113200 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr2:86106800-86108000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr2:86106800-86108400 Weak transcription A549 lung
47 chr2:86106800-86108600 Weak transcription Thymus Thymus
48 chr2:86106800-86109000 Weak transcription Primary T regulatory cells fromperipheralblood blood
49 chr2:86106800-86110600 Weak transcription Psoas Muscle Psoas
50 chr2:86106800-86112400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015