Variant report

Variant	rs72860705
Chromosome Location	chr4:81302880-81302881
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 49 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs11929913	0.83[ASN][1000 genomes]
rs11930816	0.83[ASN][1000 genomes]
rs11932267	0.83[ASN][1000 genomes]
rs11944059	0.85[ASN][1000 genomes]
rs12171340	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1458026	0.97[ASN][1000 genomes]
rs1458039	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1458045	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1495482	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17004889	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17004891	0.83[ASN][1000 genomes]
rs1994982	0.83[ASN][1000 genomes]
rs2125234	0.80[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2125235	0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2867710	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2867735	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4690155	0.81[EUR][1000 genomes]
rs57686880	0.83[ASN][1000 genomes]
rs60513752	0.83[ASN][1000 genomes]
rs60554077	0.83[ASN][1000 genomes]
rs67455947	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6818725	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6836496	0.88[ASN][1000 genomes]
rs72860710	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72860771	0.85[ASN][1000 genomes]
rs72860772	0.85[ASN][1000 genomes]
rs72860781	0.83[ASN][1000 genomes]
rs72873882	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7439958	0.98[ASN][1000 genomes]
rs7677853	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7695746	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs897962	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs897963	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:16 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2437571	chr4:81301570-81303511	Weak transcription	n/a	n/a	inside rSNPs	diseases
2	esv3449751	chr4:81301878-81303926	Weak transcription	n/a	n/a	inside rSNPs	diseases
3	esv8483	chr4:81302270-81303146	Weak transcription	n/a	n/a	inside rSNPs	diseases
4	esv2012478	chr4:81302341-81303062	Weak transcription	n/a	n/a	inside rSNPs	diseases
5	esv3465548	chr4:81302419-81302971	Weak transcription	n/a	n/a	inside rSNPs	diseases
6	esv3522946	chr4:81302425-81302976	Weak transcription	n/a	n/a	inside rSNPs	diseases
7	esv3522949	chr4:81302446-81302976	Weak transcription	n/a	n/a	inside rSNPs	diseases
8	esv3522948	chr4:81302451-81302919	Weak transcription	n/a	n/a	inside rSNPs	diseases
9	esv3522950	chr4:81302455-81302902	Weak transcription	n/a	n/a	inside rSNPs	diseases
10	esv3465546	chr4:81302462-81302939	Weak transcription	n/a	n/a	inside rSNPs	diseases
11	esv3465547	chr4:81302466-81302936	Weak transcription	n/a	n/a	inside rSNPs	diseases
12	esv3465549	chr4:81302473-81302893	Weak transcription	n/a	n/a	inside rSNPs	diseases
13	esv3522953	chr4:81302475-81302922	Weak transcription	n/a	n/a	inside rSNPs	diseases
14	esv3400371	chr4:81302495-81302892	Weak transcription	n/a	n/a	inside rSNPs	diseases
15	esv3707	chr4:81302496-81303032	Weak transcription	n/a	n/a	inside rSNPs	diseases
16	esv3522947	chr4:81302515-81302915	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:81291000-81310200	Weak transcription	Osteobl	bone
2	chr4:81292400-81306800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr4:81292600-81307000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin

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